RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 C16orf54Q6UWD8 224 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 CYP26C1Q6V0L0 522 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 MICALCLQ6ZW33 695 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 RSPH3Q86UC2 560 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 RPAP2Q8IXW5 612 aaPredicted RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 KCT2Q8NC54 265 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 TNIP2Q8NFZ5 429 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 RASSF8Q8NHQ8 419 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 ACMSDQ8TDX5 336 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 PIBF1Q8WXW3 757 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 APPBP2Q92624 585 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 SNX21Q969T3 373 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 SHDQ96IW2 340 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 C1orf74Q96LT6 269 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 NELL2Q99435 816 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 LRRC3Q9BY71 257 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 PANK2Q9BZ23 570 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 NOL6Q9H6R4 1146 aaKnown RBP3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 CNNM2Q9H8M5 875 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 PLEKHA5Q9HAU0 1116 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 ST7Q9NRC1 585 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 POLKQ9UBT6 870 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 DUSP13Q9UII6 198 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 PRELID1Q9Y255 219 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 C2CD2Q9Y426 696 aa3.47□□□□□ -1.85
SNRNP48-202ENST00000496946 RSF1Q96T23 1441 aaPredicted RBP3.46□□□□□ -1.85
SNRNP48-202ENST00000496946 RASA4BC9J798 803 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 H0Y8X5 98 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 RGS13O14921 159 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 CEP104O60308 925 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 PIP5K1CO60331 668 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 NBNO60934 754 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 CLEC3AO75596 197 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 ZNF189O75820 626 aaPredicted RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 CHMLP26374 656 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 HSPA1LP34931 641 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 UBA7P41226 1012 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 POLR2FP61218 127 aaKnown RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 PRKCQQ04759 706 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 ITIH3Q06033 890 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 PPP2R5DQ14738 602 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 ACAP1Q15027 740 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 BOLA3Q53S33 107 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 ZC3H12BQ5HYM0 836 aaKnown RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 RRP12Q5JTH9 1297 aaKnown RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 SH2D4BQ5SQS7 431 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 HYIQ5T013 277 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 KAZNQ674X7 775 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 IL31Q6EBC2 164 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 UNC5AQ6ZN44 842 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 C10orf67Q8IYJ2 551 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 CELF2-AS1Q8N7Q2 184 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 TTC8Q8TAM2 541 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 KIAA1524Q8TCG1 905 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 TCP11Q8WWU5 503 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 RSAD2Q8WXG1 361 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 JPH3Q8WXH2 748 aaPredicted RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 ARHGEF2Q92974 986 aaKnown RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 CEP95Q96GE4 821 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 MOGAT1Q96PD6 335 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 DIRC2Q96SL1 478 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 TSGA10Q9BZW7 698 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 EHMT1Q9H9B1 1298 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 FANCFQ9NPI8 374 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 AP5S1Q9NUS5 200 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 TUBA8Q9NY65 449 aaPredicted RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 FBLN5Q9UBX5 448 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 HCFC2Q9Y5Z7 792 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 TOP2BQ02880 1626 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 TMEM82A0PJX8 343 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 FAM170AA1A519 330 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 FAM221BA6H8Z2 402 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 ZNF503-AS2A6NEH8 195 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 M0QX08 132 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 RASA4O43374 803 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 EIF4EBP3O60516 100 aaPredicted RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 PSPNO60542 156 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 FOXD2O60548 495 aaPredicted RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 GCFC2P16383 781 aaKnown RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 CD9P21926 228 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 FUT4P22083 530 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 CYP2C19P33261 490 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 S100A5P33763 92 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 MAGEA9P43362 315 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 NEK3P51956 506 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 RCAN1P53805 252 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 EPHB1P54762 984 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 IKQ13123 557 aaPredicted RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 PPP2R5CQ13362 524 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 SERINC3Q13530 473 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 CRYMQ14894 314 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 SF3B3Q15393 1217 aaKnown RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 PUM3Q15397 648 aaKnown RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 ISM2Q6H9L7 571 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 C6orf15Q6UXA7 325 aaPredicted RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 ATF7IPQ6VMQ6 1270 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 RASSF3Q86WH2 238 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 ZNF354CQ86Y25 554 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 SPICE1Q8N0Z3 855 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 LRRC43Q8N309 656 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms