RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 RPAINQ86UA6 219 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 EXOC3L1Q86VI1 746 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 PLA2G4DQ86XP0 818 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 TNS4Q8IZW8 715 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 TCP11L2Q8N4U5 519 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 KCNG4Q8TDN1 519 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 SEPT1Q8WYJ6 367 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 TBATAQ96M53 351 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 SLITRK2Q9H156 845 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 ANTXR1Q9H6X2 564 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 LATS2Q9NRM7 1088 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 ATG3Q9NT62 314 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 MCUBQ9NWR8 336 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 WDR19Q8NEZ3 1342 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 A0A1W2PRG6 482 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 HSPD1P10809 573 aaKnown RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 PLCG1P19174 1290 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 PMLP29590 882 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 DDIT3P35638 169 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 FNTAP49354 379 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 ALS2CLQ60I27 953 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 SARM1Q6SZW1 724 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 C4orf50Q6ZRC1 276 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 DPP10Q8N608 796 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 NFATC2IPQ8NCF5 419 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 RAD54LQ92698 747 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 KANSL1LA0AUZ9 987 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 RANBP6O60518 1105 aaKnown RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 SEC31AO94979 1220 aaKnown RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 MSH3P20585 1137 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 SRP54P61011 504 aaKnown RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 IL9RQ01113 521 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 RAPH1Q70E73 1250 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 POLNQ7Z5Q5 900 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 TXN2Q99757 166 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 DYRK4Q9NR20 520 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 HESX1Q9UBX0 185 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 GADD45BO75293 160 aaPredicted RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 VAV1P15498 845 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 IARSP41252 1262 aaKnown RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 SLC29A2Q14542 456 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 CCDC142Q17RM4 750 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 ANO7Q6IWH7 933 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 LIN54Q6MZP7 749 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 CCDC149Q6ZUS6 474 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 BRAPQ7Z569 592 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 TAF8Q7Z7C8 310 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 RIN3Q8TB24 985 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.23□□□□□ -1.41
USF3-204ENST00000496826 CYFIP2Q96F07 1278 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 SPATA17Q96L03 361 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 IL1RAPL2Q9NP60 686 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 HMG20BQ9P0W2 317 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 RTL9Q8NET4 1388 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 A0A0G2JMP0 313 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 LRRIQ4A6NIV6 560 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 MGRN1O60291 552 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 TMCC2O75069 709 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 ATP2B4P23634 1241 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 LBRQ14739 615 aaKnown RBP6.23□□□□□ -1.41
USF3-204ENST00000496826 NCF4Q15080 339 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 NBPF14Q5TI25 921 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 IZUMO2Q6UXV1 221 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 OR4M2Q8NGB6 313 aa6.23□□□□□ -1.41
USF3-204ENST00000496826 MEFVO15553 781 aaPredicted RBP6.22□□□□□ -1.41
USF3-204ENST00000496826 CPA1P15085 419 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 ARF4P18085 180 aaPredicted RBP6.22□□□□□ -1.41
USF3-204ENST00000496826 EMC2Q15006 297 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 GADL1Q6ZQY3 521 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 OTUD6AQ7L8S5 288 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 ZNF75CPQ92670 426 aaPredicted RBP6.22□□□□□ -1.41
USF3-204ENST00000496826 RIBC2Q9H4K1 309 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 RRP7BPQ9NSQ0 103 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 KCNIP3Q9Y2W7 256 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 PRODHO43272 600 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 SERPINF2P08697 491 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 PSMD4P55036 377 aaKnown RBP6.22□□□□□ -1.41
USF3-204ENST00000496826 MECOMQ03112 1051 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 ARMC6Q6NXE6 501 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 HAUS6Q7Z4H7 955 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 PROCA1Q8NCQ7 364 aaPredicted RBP6.22□□□□□ -1.41
USF3-204ENST00000496826 RIT1Q92963 219 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 UBXN6Q9BZV1 441 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 RERGLQ9H628 205 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 DSEQ9UL01 958 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 GIT1Q9Y2X7 761 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 NFIBO00712 420 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 ECE2O60344 883 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 TNFAIP3P21580 790 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 THOC5Q13769 683 aaKnown RBP6.22□□□□□ -1.41
USF3-204ENST00000496826 ARID5BQ14865 1188 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 CNGA3Q16281 694 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 ATL3Q6DD88 541 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 MACC1Q6ZN28 852 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 NBPF5PQ86XG9 351 aaPredicted RBP6.22□□□□□ -1.41
USF3-204ENST00000496826 PLD3Q8IV08 490 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 L3MBTL4Q8NA19 623 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 ENKURQ8TC29 256 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 TP53INP1Q96A56 240 aa6.22□□□□□ -1.41
USF3-204ENST00000496826 ZBTB9Q96C00 473 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms