RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 TMX1Q9H3N1 280 aa18.09■□□□□ 0.49
DNMT3A-215ENST00000496570 PADI3Q9ULW8 664 aa18.09■□□□□ 0.49
DNMT3A-215ENST00000496570 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.09■□□□□ 0.49
DNMT3A-215ENST00000496570 PCDHB6Q9Y5E3 794 aa18.09■□□□□ 0.49
DNMT3A-215ENST00000496570 TRANK1O15050 2925 aa18.09■□□□□ 0.49
DNMT3A-215ENST00000496570 ARID2Q68CP9 1835 aa18.09■□□□□ 0.49
DNMT3A-215ENST00000496570 MAFO75444 373 aaPredicted RBP18.08■□□□□ 0.48
DNMT3A-215ENST00000496570 OR52Z1P0C646 297 aa18.08■□□□□ 0.48
DNMT3A-215ENST00000496570 CYP4A11Q02928 519 aa18.08■□□□□ 0.48
DNMT3A-215ENST00000496570 TBC1D8BQ0IIM8 1120 aa18.08■□□□□ 0.48
DNMT3A-215ENST00000496570 GNL2Q13823 731 aaKnown RBP18.08■□□□□ 0.48
DNMT3A-215ENST00000496570 TMEM266Q2M3C6 531 aa18.08■□□□□ 0.48
DNMT3A-215ENST00000496570 SPRED2Q7Z698 418 aa18.08■□□□□ 0.48
DNMT3A-215ENST00000496570 CRIPAKQ8N1N5 446 aa18.08■□□□□ 0.48
DNMT3A-215ENST00000496570 CYP26B1Q9NR63 512 aa18.08■□□□□ 0.48
DNMT3A-215ENST00000496570 NOC2LQ9Y3T9 749 aaKnown RBP18.08■□□□□ 0.48
DNMT3A-215ENST00000496570 COL4A6Q14031 1691 aa18.08■□□□□ 0.48
DNMT3A-215ENST00000496570 M0QZ92 97 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 ENPP3O14638 875 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 LYPLA2O95372 231 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 AMHP03971 560 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 SPATA31C1P0DKV0 1188 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 CRYBB1P53674 252 aaPredicted RBP18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 TAP1Q03518 808 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 MYOCDQ8IZQ8 938 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 USP38Q8NB14 1042 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 MYLIPQ8WY64 445 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 TOP1MTQ969P6 601 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 OSMRQ99650 979 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 ZSWIM4Q9H7M6 989 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 SUGCTQ9HAC7 445 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 SLC28A3Q9HAS3 691 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 ERVK-5Q9HDB9 667 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 STXBP5LQ9Y2K9 1186 aa18.07■□□□□ 0.48
DNMT3A-215ENST00000496570 TLL1O43897 1013 aa18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 YWHABP31946 246 aaKnown RBP18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 NLRP11P59045 1033 aaKnown RBP18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 HTRA4P83105 476 aaPredicted RBP18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 LARP1BQ659C4 914 aaKnown RBP18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 PPP2R2DQ66LE6 453 aa18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 FAM117BQ6P1L5 589 aa18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 FAM228AQ86W67 206 aa18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 TPH2Q8IWU9 490 aa18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 DHX33Q9H6R0 707 aaKnown RBP18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 NOL7Q9UMY1 257 aaKnown RBP18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 AKT3Q9Y243 479 aa18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 GINS2Q9Y248 185 aa18.06■□□□□ 0.48
DNMT3A-215ENST00000496570 MGEA5O60502 916 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 DKC1O60832 514 aaKnown RBP eCLIP18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 MED24O75448 989 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 TMOD1P28289 359 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 TECP42680 631 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 GPC3P51654 580 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 PTGDRQ13258 359 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 IL17AQ16552 155 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 MCTP1Q6DN14 999 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 NEK9Q8TD19 979 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 SP7Q8TDD2 431 aaPredicted RBP18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 SNX21Q969T3 373 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 ZNF668Q96K58 619 aaPredicted RBP18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 CEP170P1Q96L14 293 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 MAP7D2Q96T17 732 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 RAD9AQ99638 391 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 PRDM12Q9H4Q4 367 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 RC3H2Q9HBD1 1191 aaKnown RBP18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 TTC3P53804 2025 aa18.05■□□□□ 0.48
DNMT3A-215ENST00000496570 A0A087WWV3 80 aa18.04■□□□□ 0.48
DNMT3A-215ENST00000496570 EPOPA6NHQ4 379 aa18.04■□□□□ 0.48
DNMT3A-215ENST00000496570 H3BQV1 296 aa18.04■□□□□ 0.48
DNMT3A-215ENST00000496570 K7ELQ4 463 aaPredicted RBP18.04■□□□□ 0.48
DNMT3A-215ENST00000496570 RPS6KA5O75582 802 aa18.04■□□□□ 0.48
DNMT3A-215ENST00000496570 FXR2P51116 673 aaKnown RBP eCLIP18.04■□□□□ 0.48
DNMT3A-215ENST00000496570 PAK2Q13177 524 aa18.04■□□□□ 0.48
DNMT3A-215ENST00000496570 CATSPER3Q86XQ3 398 aa18.04■□□□□ 0.48
DNMT3A-215ENST00000496570 INTS4Q96HW7 963 aaKnown RBP18.04■□□□□ 0.48
DNMT3A-215ENST00000496570 TSPYL2Q9H2G4 693 aaPredicted RBP18.04■□□□□ 0.48
DNMT3A-215ENST00000496570 XPNPEP1Q9NQW7 623 aa18.04■□□□□ 0.48
DNMT3A-215ENST00000496570 ST3GAL5Q9UNP4 418 aa18.04■□□□□ 0.48
DNMT3A-215ENST00000496570 PPME1Q9Y570 386 aa18.04■□□□□ 0.48
DNMT3A-215ENST00000496570 LINC01553A4QN01 128 aa18.03■□□□□ 0.48
DNMT3A-215ENST00000496570 ADGRE1Q14246 886 aa18.03■□□□□ 0.48
DNMT3A-215ENST00000496570 RILPL1Q5EBL4 403 aa18.03■□□□□ 0.48
DNMT3A-215ENST00000496570 ZBED2Q9BTP6 218 aa18.03■□□□□ 0.48
DNMT3A-215ENST00000496570 POLR3CQ9BUI4 534 aaPredicted RBP18.03■□□□□ 0.48
DNMT3A-215ENST00000496570 FTHL17Q9BXU8 183 aa18.03■□□□□ 0.48
DNMT3A-215ENST00000496570 REV3LO60673 3130 aa18.03■□□□□ 0.48
DNMT3A-215ENST00000496570 UPP2O95045 317 aa18.02■□□□□ 0.48
DNMT3A-215ENST00000496570 DARSP14868 501 aaKnown RBP18.02■□□□□ 0.48
DNMT3A-215ENST00000496570 EIF4BP23588 611 aaKnown RBP18.02■□□□□ 0.48
DNMT3A-215ENST00000496570 RFC5P40937 340 aa18.02■□□□□ 0.48
DNMT3A-215ENST00000496570 NFX1Q12986 1120 aaKnown RBP18.02■□□□□ 0.48
DNMT3A-215ENST00000496570 DSC3Q14574 896 aa18.02■□□□□ 0.48
DNMT3A-215ENST00000496570 ECM1Q16610 540 aa18.02■□□□□ 0.48
DNMT3A-215ENST00000496570 XKR9Q5GH70 373 aa18.02■□□□□ 0.48
DNMT3A-215ENST00000496570 OTUD6AQ7L8S5 288 aa18.02■□□□□ 0.48
DNMT3A-215ENST00000496570 KSR1Q8IVT5 923 aa18.02■□□□□ 0.48
DNMT3A-215ENST00000496570 ZNF710Q8N1W2 664 aa18.02■□□□□ 0.48
DNMT3A-215ENST00000496570 IGSF22Q8N9C0 903 aa18.02■□□□□ 0.48
DNMT3A-215ENST00000496570 PIGOQ8TEQ8 1089 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms