RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 METTL13Q8N6R0 699 aa13.85□□□□□ -0.19
TRIM59-207ENST00000496222 ZNF579Q8NAF0 562 aaKnown RBP13.85□□□□□ -0.19
TRIM59-207ENST00000496222 SH2D3AQ9BRG2 576 aa13.85□□□□□ -0.19
TRIM59-207ENST00000496222 ZBED2Q9BTP6 218 aa13.85□□□□□ -0.19
TRIM59-207ENST00000496222 BACH2Q9BYV9 841 aa13.85□□□□□ -0.19
TRIM59-207ENST00000496222 TSPYL2Q9H2G4 693 aaPredicted RBP13.85□□□□□ -0.19
TRIM59-207ENST00000496222 TMEM60Q9H2L4 133 aa13.85□□□□□ -0.19
TRIM59-207ENST00000496222 CERS4Q9HA82 394 aa13.85□□□□□ -0.19
TRIM59-207ENST00000496222 NOC2LQ9Y3T9 749 aaKnown RBP13.85□□□□□ -0.19
TRIM59-207ENST00000496222 INSL6Q9Y581 213 aa13.85□□□□□ -0.19
TRIM59-207ENST00000496222 M0QZ92 97 aa13.84□□□□□ -0.19
TRIM59-207ENST00000496222 ST18O60284 1047 aa13.84□□□□□ -0.19
TRIM59-207ENST00000496222 MGEA5O60502 916 aa13.84□□□□□ -0.19
TRIM59-207ENST00000496222 U2AF2P26368 475 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRIM59-207ENST00000496222 QARSP47897 775 aaKnown RBP13.84□□□□□ -0.19
TRIM59-207ENST00000496222 CRYBB1P53674 252 aaPredicted RBP13.84□□□□□ -0.19
TRIM59-207ENST00000496222 ERVK-21P61565 698 aa13.84□□□□□ -0.19
TRIM59-207ENST00000496222 SLFN12Q8IYM2 578 aa13.84□□□□□ -0.19
TRIM59-207ENST00000496222 ZNF689Q96CS4 500 aaPredicted RBP13.84□□□□□ -0.19
TRIM59-207ENST00000496222 PPP1R16BQ96T49 567 aa13.84□□□□□ -0.19
TRIM59-207ENST00000496222 HSD17B14Q9BPX1 270 aa13.84□□□□□ -0.19
TRIM59-207ENST00000496222 UPF2Q9HAU5 1272 aaKnown RBP13.84□□□□□ -0.19
TRIM59-207ENST00000496222 RGL1Q9NZL6 768 aa13.84□□□□□ -0.19
TRIM59-207ENST00000496222 PRRC2BQ5JSZ5 2229 aaKnown RBP13.83□□□□□ -0.2
TRIM59-207ENST00000496222 COL4A4P53420 1690 aaPredicted RBP13.83□□□□□ -0.2
TRIM59-207ENST00000496222 DDX11L8A8MPP1 907 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 ZBTB39O15060 712 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 NEMFO60524 1076 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 MAFO75444 373 aaPredicted RBP13.83□□□□□ -0.2
TRIM59-207ENST00000496222 SLITRK3O94933 977 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 UPP2O95045 317 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 TOB1P50616 345 aaPredicted RBP13.83□□□□□ -0.2
TRIM59-207ENST00000496222 NPEPPSP55786 919 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 NLRP11P59045 1033 aaKnown RBP13.83□□□□□ -0.2
TRIM59-207ENST00000496222 SAFBQ15424 915 aaKnown RBP eCLIP13.83□□□□□ -0.2
TRIM59-207ENST00000496222 CALCRLQ16602 461 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 MTERF2Q49AM1 385 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 PLA2G4FQ68DD2 849 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 FAM228AQ86W67 206 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 NOSTRINQ8IVI9 506 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 C4orf19Q8IY42 314 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 C4orf32Q8N8J7 132 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 DYDC2Q96IM9 177 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 GAS2L1Q99501 681 aaPredicted RBP13.83□□□□□ -0.2
TRIM59-207ENST00000496222 OSMRQ99650 979 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 FTHL17Q9BXU8 183 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 TTC12Q9H892 705 aaPredicted RBP13.83□□□□□ -0.2
TRIM59-207ENST00000496222 SEPT9Q9UHD8 586 aaPredicted RBP13.83□□□□□ -0.2
TRIM59-207ENST00000496222 PCDHA12Q9UN75 941 aa13.83□□□□□ -0.2
TRIM59-207ENST00000496222 BAG4O95429 457 aaKnown RBP13.82□□□□□ -0.2
TRIM59-207ENST00000496222 TMOD1P28289 359 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 MCM7P33993 719 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 GPC3P51654 580 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 TBC1D8BQ0IIM8 1120 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 PAK2Q13177 524 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 DSC3Q14574 896 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 NCAPH2Q6IBW4 605 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 FAM43BQ6ZT52 329 aaPredicted RBP13.82□□□□□ -0.2
TRIM59-207ENST00000496222 SLC17A8Q8NDX2 589 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 ARNTL2Q8WYA1 636 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 TGS1Q96RS0 853 aaKnown RBP13.82□□□□□ -0.2
TRIM59-207ENST00000496222 EIF2AK1Q9BQI3 630 aaKnown RBP13.82□□□□□ -0.2
TRIM59-207ENST00000496222 LXNQ9BS40 222 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 C17orf80Q9BSJ5 609 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 SUGCTQ9HAC7 445 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 CYP26B1Q9NR63 512 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 ST3GAL5Q9UNP4 418 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 AKT3Q9Y243 479 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 GINS2Q9Y248 185 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 MTCH2Q9Y6C9 303 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 ARID2Q68CP9 1835 aa13.82□□□□□ -0.2
TRIM59-207ENST00000496222 MUC3AQ02505 3323 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 NLRC5Q86WI3 1866 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 RPS6KA5O75582 802 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 DGKIO75912 1065 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 LYPLA2O95372 231 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 ATP2B1P20020 1258 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 EIF4BP23588 611 aaKnown RBP13.81□□□□□ -0.2
TRIM59-207ENST00000496222 TXKP42681 527 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 MCM2P49736 904 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 FAM189BP81408 668 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 NFX1Q12986 1120 aaKnown RBP13.81□□□□□ -0.2
TRIM59-207ENST00000496222 GRB10Q13322 594 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 CTTNQ14247 550 aaKnown RBP13.81□□□□□ -0.2
TRIM59-207ENST00000496222 ZNF710Q8N1W2 664 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 FAM184AQ8NB25 1140 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 ZNF668Q96K58 619 aaPredicted RBP13.81□□□□□ -0.2
TRIM59-207ENST00000496222 MAP7D2Q96T17 732 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 YME1L1Q96TA2 773 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 DHX33Q9H6R0 707 aaKnown RBP13.81□□□□□ -0.2
TRIM59-207ENST00000496222 ZSWIM4Q9H7M6 989 aa13.81□□□□□ -0.2
TRIM59-207ENST00000496222 C9IYK1 514 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 MARCH6O60337 910 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 SPATA31C1P0DKV0 1188 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 DARSP14868 501 aaKnown RBP13.8□□□□□ -0.2
TRIM59-207ENST00000496222 IGFBP4P22692 258 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 YWHABP31946 246 aaKnown RBP13.8□□□□□ -0.2
TRIM59-207ENST00000496222 TRAPPC10P48553 1259 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 CYP4A11Q02928 519 aa13.8□□□□□ -0.2
TRIM59-207ENST00000496222 ORC2Q13416 577 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms