RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 GUCY2CP25092 1073 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 GJA8P48165 433 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 IGBP1P78318 339 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 TBC1D8BQ0IIM8 1120 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 GRIK4Q16099 956 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 C7orf31Q8N865 590 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 VTI1AQ96AJ9 217 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 GLT1D1Q96MS3 346 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 HDAC6Q9UBN7 1215 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 GRIN2DO15399 1336 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 COL1A2P08123 1366 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 RRN3P2A6NIE6 340 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 MAFO75444 373 aaPredicted RBP24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 POLGP54098 1239 aaPredicted RBP24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 CACNB1Q02641 598 aaPredicted RBP24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 MARCH8Q5T0T0 291 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 SPATA20Q8TB22 786 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 SLC7A3Q8WY07 619 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 REEP2Q9BRK0 252 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 KIAA1468Q9P260 1216 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 EVPLQ92817 2033 aa24.21■■□□□ 1.47
ECHDC3-205ENST00000496136 TRIP12Q14669 1992 aaPredicted RBP24.2■■□□□ 1.46
ECHDC3-205ENST00000496136 A0A1W2PQ45 241 aaPredicted RBP24.2■■□□□ 1.46
ECHDC3-205ENST00000496136 A0A1W2PQY0 241 aa24.2■■□□□ 1.46
ECHDC3-205ENST00000496136 KRT18P05783 430 aaKnown RBP24.2■■□□□ 1.46
ECHDC3-205ENST00000496136 KLRC1P26715 233 aa24.2■■□□□ 1.46
ECHDC3-205ENST00000496136 RFC5P40937 340 aa24.2■■□□□ 1.46
ECHDC3-205ENST00000496136 HIC1Q14526 733 aa24.2■■□□□ 1.46
ECHDC3-205ENST00000496136 MAEAQ7L5Y9 396 aa24.2■■□□□ 1.46
ECHDC3-205ENST00000496136 LMBR1Q8WVP7 490 aa24.2■■□□□ 1.46
ECHDC3-205ENST00000496136 TMEM106CQ9BVX2 250 aa24.2■■□□□ 1.46
ECHDC3-205ENST00000496136 XPNPEP1Q9NQW7 623 aa24.2■■□□□ 1.46
ECHDC3-205ENST00000496136 DNAH12Q6ZR08 3092 aa24.2■■□□□ 1.46
ECHDC3-205ENST00000496136 IGKV6-21A0A0C4DH24 114 aa24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 SARSP49591 514 aaKnown RBP24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 ASIC1P78348 528 aa24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 ADAM17P78536 824 aa24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 RBM43Q6ZSC3 357 aaKnown RBP24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 ZBTB10Q96DT7 871 aa24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 ATP6V0A4Q9HBG4 840 aa24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 KLRC4O43908 158 aa24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 C22orf31O95567 290 aa24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 HOXC8P31273 242 aa24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 MNX1P50219 401 aaPredicted RBP24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 ITGA7Q13683 1181 aa24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 EMC2Q15006 297 aa24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 MTHFD1LQ6UB35 978 aa24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 EXOC8Q8IYI6 725 aa24.19■■□□□ 1.46
ECHDC3-205ENST00000496136 RSPH10B2B2RC85 870 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 MAGEB2O15479 319 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 SMC2O95347 1197 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 RSPH10BP0C881 870 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 IDEP14735 1019 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 SOX10P56693 466 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 NT5DC1Q5TFE4 455 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 NFRKBQ6P4R8 1299 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 DAW1Q8N136 415 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 MCPH1Q8NEM0 835 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 TIPINQ9BVW5 301 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 SUGCTQ9HAC7 445 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 GPRC5CQ9NQ84 441 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 GTF2IRD1Q9UHL9 959 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 TUBE1Q9UJT0 475 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 ODF2LQ9ULJ1 636 aa24.18■■□□□ 1.46
ECHDC3-205ENST00000496136 PVALEFA0A1B0GWK0 134 aa24.17■■□□□ 1.46
ECHDC3-205ENST00000496136 SFI1A8K8P3 1242 aa24.17■■□□□ 1.46
ECHDC3-205ENST00000496136 HIP1RO75146 1068 aa24.17■■□□□ 1.46
ECHDC3-205ENST00000496136 RPN1P04843 607 aaKnown RBP24.17■■□□□ 1.46
ECHDC3-205ENST00000496136 MAPK7Q13164 816 aa24.17■■□□□ 1.46
ECHDC3-205ENST00000496136 EFCAB12Q6NXP0 572 aa24.17■■□□□ 1.46
ECHDC3-205ENST00000496136 SESTD1Q86VW0 696 aa24.17■■□□□ 1.46
ECHDC3-205ENST00000496136 SMARCE1Q969G3 411 aa24.17■■□□□ 1.46
ECHDC3-205ENST00000496136 GSDMAQ96QA5 445 aa24.17■■□□□ 1.46
ECHDC3-205ENST00000496136 STARD7Q9NQZ5 370 aa24.17■■□□□ 1.46
ECHDC3-205ENST00000496136 MYH11P35749 1972 aa24.17■■□□□ 1.46
ECHDC3-205ENST00000496136 C17orf102A2RUQ5 167 aa24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 MBLAC1A4D2B0 266 aaPredicted RBP24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 ZNF200P98182 395 aaPredicted RBP24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 MKRN4PQ13434 485 aaPredicted RBP24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 FAM102BQ5T8I3 360 aa24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 UNC13DQ70J99 1090 aa24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 TMEM143Q96AN5 459 aa24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 JPH2Q9BR39 696 aaPredicted RBP24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 PANK4Q9NVE7 773 aa24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 FRMD3A2A2Y4 597 aa24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 GNAT1P11488 350 aa24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 DRP2Q13474 957 aa24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 KMT5BQ4FZB7 885 aa24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 FAM47CQ5HY64 1035 aa24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 METTL13Q8N6R0 699 aa24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 RETREG2Q8NC44 543 aa24.16■■□□□ 1.46
ECHDC3-205ENST00000496136 TREHO43280 583 aa24.15■■□□□ 1.46
ECHDC3-205ENST00000496136 LETM1O95202 739 aaPredicted RBP24.15■■□□□ 1.46
ECHDC3-205ENST00000496136 ZNF131P52739 623 aa24.15■■□□□ 1.46
ECHDC3-205ENST00000496136 CCDC65Q8IXS2 484 aa24.15■■□□□ 1.46
ECHDC3-205ENST00000496136 LRRC71Q8N4P6 559 aa24.15■■□□□ 1.46
ECHDC3-205ENST00000496136 SLC43A3Q8NBI5 491 aa24.15■■□□□ 1.46
ECHDC3-205ENST00000496136 ZHX3Q9H4I2 956 aa24.15■■□□□ 1.46
ECHDC3-205ENST00000496136 GAS2O43903 313 aaKnown RBP24.14■■□□□ 1.46
ECHDC3-205ENST00000496136 TBCAO75347 108 aaKnown RBP24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms