RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SOWAHBA6NEL2 793 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 WDR64B1ANS9 1081 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 SMAPO00193 183 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 VWA5AO00534 786 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 RRP9O43818 475 aaKnown RBP7.61□□□□□ -1.19
USP39-219ENST00000496047 URI1O94763 535 aaPredicted RBP7.61□□□□□ -1.19
USP39-219ENST00000496047 NDUFA10O95299 355 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 SPATA31C1P0DKV0 1188 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 MAPTP10636 758 aaKnown RBP7.61□□□□□ -1.19
USP39-219ENST00000496047 MYCLP12524 364 aaPredicted RBP7.61□□□□□ -1.19
USP39-219ENST00000496047 XRCC5P13010 732 aaKnown RBP7.61□□□□□ -1.19
USP39-219ENST00000496047 PTPRAP18433 802 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 NR2F2P24468 414 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 FXR1P51114 621 aaKnown RBP eCLIP7.61□□□□□ -1.19
USP39-219ENST00000496047 MARSP56192 900 aaKnown RBP7.61□□□□□ -1.19
USP39-219ENST00000496047 USP46P62068 366 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 CDK17Q00537 523 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 GOLGA8FQ08AF8 430 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 GOLGA8DPQ0D2H9 430 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 ADAM9Q13443 819 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 GIT2Q14161 759 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 COG2Q14746 738 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 PGM5Q15124 567 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 ECM1Q16610 540 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 BMT2Q1RMZ1 405 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 SNRNP48Q6IEG0 339 aaKnown RBP7.61□□□□□ -1.19
USP39-219ENST00000496047 OTUD6AQ7L8S5 288 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 FRMD5Q7Z6J6 570 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 IRF2BP1Q8IU81 584 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 NELFCDQ8IXH7 590 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 FAM178BQ8IXR5 827 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 SYCP3Q8IZU3 236 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 PDCL2Q8N4E4 241 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 MYCT1Q8N699 235 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 CEP112Q8N8E3 955 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 ZNF507Q8TCN5 953 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 ATP6V0A1Q93050 837 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 CCDC42Q96M95 316 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 DRC1Q96MC2 740 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 RMDN3Q96TC7 470 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 LXNQ9BS40 222 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 MKNK1Q9BUB5 465 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 TEX13BQ9BXU2 312 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 UNC45AQ9H3U1 944 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 TMEM206Q9H813 350 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 TBC1D7Q9P0N9 293 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 CEP72Q9P209 647 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.61□□□□□ -1.19
USP39-219ENST00000496047 ARMCX3Q9UH62 379 aaPredicted RBP7.61□□□□□ -1.19
USP39-219ENST00000496047 KCNG1Q9UIX4 513 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 TRAF3IP3Q9Y228 551 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 FRMD4BQ9Y2L6 1034 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 TTC26A0AVF1 554 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 H0YCG3 227 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 K7ENM7 598 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 DDX39AO00148 427 aaKnown RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 NFIBO00712 420 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 ATP2A1O14983 1001 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 CTIFO43310 598 aaKnown RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 N4BP1O75113 896 aaKnown RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 CD46P15529 392 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 EIF2AK2P19525 551 aaKnown RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 GUCY2CP25092 1073 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 QARSP47897 775 aaKnown RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 HMGCS2P54868 508 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 RPS6P62753 249 aaKnown RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 RAD51AP2Q09MP3 1159 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 CETN1Q12798 172 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 CTTNQ14247 550 aaKnown RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 LRRC41Q15345 812 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 NFIL3Q16649 462 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 PTPN21Q16825 1174 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 SLC9C1Q4G0N8 1177 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 ZCWPW2Q504Y3 356 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 TDRD12Q587J7 1177 aaKnown RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 TCERG1LQ5VWI1 586 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 IQCEQ6IPM2 695 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 ZNF746Q6NUN9 644 aaPredicted RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 RINT1Q6NUQ1 792 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 LRRC55Q6ZSA7 311 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 TOGARAM2Q6ZUX3 1019 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 USP37Q86T82 979 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 VPS36Q86VN1 386 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 REXO1L1PQ8IX06 675 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 SMAP1Q8IYB5 467 aaPredicted RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 CHST13Q8NET6 341 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 SYTL5Q8TDW5 730 aaPredicted RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 NSUN6Q8TEA1 469 aaKnown RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 HPS3Q969F9 1004 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 GJA10Q969M2 543 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 JAKMIP2Q96AA8 810 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 HVCN1Q96D96 273 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 ATG4CQ96DT6 458 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 ZFRQ96KR1 1074 aaKnown RBP7.6□□□□□ -1.19
USP39-219ENST00000496047 ALS2CR12Q96Q35 445 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 LZTFL1Q9NQ48 299 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 PXMP2Q9NR77 195 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 WBP1LQ9NX94 342 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 RNF181Q9P0P0 153 aa7.6□□□□□ -1.19
USP39-219ENST00000496047 DBR1Q9UK59 544 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms