RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 TMEM31Q5JXX7 168 aa20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 SPOUT1Q5T280 376 aaKnown RBP20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 KLHL23Q8NBE8 558 aa20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 TBCKQ8TEA7 893 aa20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 ZNF274Q96GC6 653 aaPredicted RBP20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 LARP6Q9BRS8 491 aaKnown RBP20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 TEKT3Q9BXF9 490 aa20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 UPF3BQ9BZI7 483 aaKnown RBP20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 TM6SF1Q9BZW5 370 aa20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 IGFLR1Q9H665 355 aa20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 AKT3Q9Y243 479 aa20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 LOXHD1Q8IVV2 1947 aa20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 GPR32O75388 356 aa20.79■□□□□ 0.92
CLCNKA-207ENST00000495784 SFNP31947 248 aa20.79■□□□□ 0.92
CLCNKA-207ENST00000495784 JAK3P52333 1124 aa20.79■□□□□ 0.92
CLCNKA-207ENST00000495784 PRKCEQ02156 737 aa20.79■□□□□ 0.92
CLCNKA-207ENST00000495784 CAMK1Q14012 370 aa20.79■□□□□ 0.92
CLCNKA-207ENST00000495784 CTC1Q2NKJ3 1217 aa20.79■□□□□ 0.92
CLCNKA-207ENST00000495784 EFCAB12Q6NXP0 572 aa20.79■□□□□ 0.92
CLCNKA-207ENST00000495784 FAM228AQ86W67 206 aa20.79■□□□□ 0.92
CLCNKA-207ENST00000495784 SPPL3Q8TCT6 385 aa20.79■□□□□ 0.92
CLCNKA-207ENST00000495784 SLC5A5Q92911 643 aa20.79■□□□□ 0.92
CLCNKA-207ENST00000495784 MYH9P35579 1960 aaKnown RBP20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 TBKBP1A7MCY6 615 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 C9IYK1 514 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 EDIL3O43854 480 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 ZNF862O60290 1169 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 LTBRP36941 435 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 NLRP11P59045 1033 aaKnown RBP20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 STK3Q13188 491 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 BLIDQ8IZY5 108 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 ZNF710Q8N1W2 664 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 LRRC71Q8N4P6 559 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 POF1BQ8WVV4 589 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 LRFN3Q9BTN0 628 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 UNC45AQ9H3U1 944 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 ATP6V0A4Q9HBG4 840 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 AAASQ9NRG9 546 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 PCDHB12Q9Y5F1 795 aa20.78■□□□□ 0.92
CLCNKA-207ENST00000495784 PI4K2BG5E9Z4 385 aa20.77■□□□□ 0.92
CLCNKA-207ENST00000495784 NEFLP07196 543 aa20.77■□□□□ 0.92
CLCNKA-207ENST00000495784 DNAJB1P25685 340 aa20.77■□□□□ 0.92
CLCNKA-207ENST00000495784 GTF2F1P35269 517 aaKnown RBP eCLIP20.77■□□□□ 0.92
CLCNKA-207ENST00000495784 CLUL1Q15846 466 aa20.77■□□□□ 0.92
CLCNKA-207ENST00000495784 UGCGQ16739 394 aa20.77■□□□□ 0.92
CLCNKA-207ENST00000495784 FAM102BQ5T8I3 360 aa20.77■□□□□ 0.92
CLCNKA-207ENST00000495784 GALNT17Q6IS24 598 aa20.77■□□□□ 0.92
CLCNKA-207ENST00000495784 GJA10Q969M2 543 aa20.77■□□□□ 0.92
CLCNKA-207ENST00000495784 SCLT1Q96NL6 688 aa20.77■□□□□ 0.92
CLCNKA-207ENST00000495784 PDRG1Q9NUG6 133 aa20.77■□□□□ 0.92
CLCNKA-207ENST00000495784 TMEM161AQ9NX61 479 aa20.77■□□□□ 0.92
CLCNKA-207ENST00000495784 PRKAG3Q9UGI9 489 aa20.77■□□□□ 0.92
CLCNKA-207ENST00000495784 EVPLQ92817 2033 aa20.77■□□□□ 0.91
CLCNKA-207ENST00000495784 TDP2O95551 362 aa20.76■□□□□ 0.91
CLCNKA-207ENST00000495784 DLX2Q07687 328 aaPredicted RBP20.76■□□□□ 0.91
CLCNKA-207ENST00000495784 TBC1D8BQ0IIM8 1120 aa20.76■□□□□ 0.91
CLCNKA-207ENST00000495784 Q4G0T1 1027 aa20.76■□□□□ 0.91
CLCNKA-207ENST00000495784 MIER3Q7Z3K6 550 aa20.76■□□□□ 0.91
CLCNKA-207ENST00000495784 FAM177A1Q8N128 213 aaPredicted RBP20.76■□□□□ 0.91
CLCNKA-207ENST00000495784 RDM1Q8NG50 284 aa20.76■□□□□ 0.91
CLCNKA-207ENST00000495784 CYP3A7-CYP3A51PA0A087WV96 503 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 FAM86C2PA6NEL3 165 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 LINC01565O15544 149 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 TBX10O75333 385 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 PSMD10O75832 226 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 FGFR1P11362 822 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 ZSCAN20P17040 1043 aaPredicted RBP20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 EIF4BP23588 611 aaKnown RBP20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 CYP3A7P24462 503 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 IRS1P35568 1242 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 NDUFV1P49821 464 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 FAM189BP81408 668 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 ZP2Q05996 745 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 DSC3Q14574 896 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 LINC01465Q8N7H1 131 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 DAGLBQ8NCG7 672 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 AIFM3Q96NN9 605 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 ADAMTS10Q9H324 1103 aa20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 ELAC1Q9H777 363 aaKnown RBP20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 SEPT9Q9UHD8 586 aaPredicted RBP20.75■□□□□ 0.91
CLCNKA-207ENST00000495784 ATG2AQ2TAZ0 1938 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 KIAA1671Q9BY89 1806 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 GPR37L1O60883 481 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 CDKL5O76039 1030 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 ALADP13716 330 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 UBE3AQ05086 875 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 ADAM15Q13444 863 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 NONOQ15233 471 aaKnown RBP eCLIP20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 CSPP1Q1MSJ5 1256 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 ADGRD2Q7Z7M1 963 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 ADHFE1Q8IWW8 467 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 THNSL1Q8IYQ7 743 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 MICAL1Q8TDZ2 1067 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 ZNF668Q96K58 619 aaPredicted RBP20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 TYW1Q9NV66 732 aaKnown RBP20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 CD207Q9UJ71 328 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 HCN4Q9Y3Q4 1203 aa20.74■□□□□ 0.91
CLCNKA-207ENST00000495784 M0R2N6 131 aa20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 HOXA2O43364 376 aa20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 MBTPS2O43462 519 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms