RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 H3BQV1 296 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 M0QZ92 97 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 DKC1O60832 514 aaKnown RBP eCLIP16.1■□□□□ 0.17
SCAP-213ENST00000494938 LYPLA2O95372 231 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 GJB5O95377 273 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 OR52Z1P0C646 297 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 SPATA31C1P0DKV0 1188 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 TMOD1P28289 359 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 TOP1MTQ969P6 601 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 SNX21Q969T3 373 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 PPP1R16BQ96T49 567 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 RAD9AQ99638 391 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 TMX1Q9H3N1 280 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 CYP26B1Q9NR63 512 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 GINS2Q9Y248 185 aa16.1■□□□□ 0.17
SCAP-213ENST00000494938 CDH23Q9H251 3354 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 A0A087WWV3 80 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 LCHNA4D1U4 455 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 POTEMA6NI47 508 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 TLL1O43897 1013 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 AMHP03971 560 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 CA3P07451 260 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 YWHABP31946 246 aaKnown RBP16.09■□□□□ 0.17
SCAP-213ENST00000494938 NLRP11P59045 1033 aaKnown RBP16.09■□□□□ 0.17
SCAP-213ENST00000494938 PTGDRQ13258 359 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 IL17AQ16552 155 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 TMEM266Q2M3C6 531 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 FAM117BQ6P1L5 589 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 LINC01599Q8WXQ3 324 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 INTS4Q96HW7 963 aaKnown RBP16.09■□□□□ 0.17
SCAP-213ENST00000494938 CEP170P1Q96L14 293 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 SLC28A3Q9HAS3 691 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 ERVK-5Q9HDB9 667 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.09■□□□□ 0.17
SCAP-213ENST00000494938 AKT3Q9Y243 479 aa16.09■□□□□ 0.17
SCAP-213ENST00000494938 COL6A3P12111 3177 aa16.08■□□□□ 0.17
SCAP-213ENST00000494938 K7ELQ4 463 aaPredicted RBP16.08■□□□□ 0.16
SCAP-213ENST00000494938 HTRA4P83105 476 aaPredicted RBP16.08■□□□□ 0.16
SCAP-213ENST00000494938 TAP1Q03518 808 aa16.08■□□□□ 0.16
SCAP-213ENST00000494938 OTUD6AQ7L8S5 288 aa16.08■□□□□ 0.16
SCAP-213ENST00000494938 CATSPER3Q86XQ3 398 aa16.08■□□□□ 0.16
SCAP-213ENST00000494938 MYOCDQ8IZQ8 938 aa16.08■□□□□ 0.16
SCAP-213ENST00000494938 CRIPAKQ8N1N5 446 aa16.08■□□□□ 0.16
SCAP-213ENST00000494938 ZNF710Q8N1W2 664 aa16.08■□□□□ 0.16
SCAP-213ENST00000494938 ZNF668Q96K58 619 aaPredicted RBP16.08■□□□□ 0.16
SCAP-213ENST00000494938 OSMRQ99650 979 aa16.08■□□□□ 0.16
SCAP-213ENST00000494938 ZBED2Q9BTP6 218 aa16.08■□□□□ 0.16
SCAP-213ENST00000494938 DHX33Q9H6R0 707 aaKnown RBP16.08■□□□□ 0.16
SCAP-213ENST00000494938 SUCLA2Q9P2R7 463 aaPredicted RBP16.08■□□□□ 0.16
SCAP-213ENST00000494938 ST3GAL5Q9UNP4 418 aa16.08■□□□□ 0.16
SCAP-213ENST00000494938 STXBP5LQ9Y2K9 1186 aa16.08■□□□□ 0.16
SCAP-213ENST00000494938 PPME1Q9Y570 386 aa16.08■□□□□ 0.16
SCAP-213ENST00000494938 TANC1Q9C0D5 1861 aa16.08■□□□□ 0.16
SCAP-213ENST00000494938 MGEA5O60502 916 aa16.07■□□□□ 0.16
SCAP-213ENST00000494938 MED24O75448 989 aa16.07■□□□□ 0.16
SCAP-213ENST00000494938 RPS6KA5O75582 802 aa16.07■□□□□ 0.16
SCAP-213ENST00000494938 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.16
SCAP-213ENST00000494938 GPC3P51654 580 aa16.07■□□□□ 0.16
SCAP-213ENST00000494938 PAK2Q13177 524 aa16.07■□□□□ 0.16
SCAP-213ENST00000494938 PDIA5Q14554 519 aa16.07■□□□□ 0.16
SCAP-213ENST00000494938 RILPL1Q5EBL4 403 aa16.07■□□□□ 0.16
SCAP-213ENST00000494938 PPP2R2DQ66LE6 453 aa16.07■□□□□ 0.16
SCAP-213ENST00000494938 FAM228AQ86W67 206 aa16.07■□□□□ 0.16
SCAP-213ENST00000494938 NEK9Q8TD19 979 aa16.07■□□□□ 0.16
SCAP-213ENST00000494938 MYLIPQ8WY64 445 aa16.07■□□□□ 0.16
SCAP-213ENST00000494938 MAP7D2Q96T17 732 aa16.07■□□□□ 0.16
SCAP-213ENST00000494938 POLR3CQ9BUI4 534 aaPredicted RBP16.07■□□□□ 0.16
SCAP-213ENST00000494938 TSPYL2Q9H2G4 693 aaPredicted RBP16.07■□□□□ 0.16
SCAP-213ENST00000494938 ANKEF1Q9NU02 776 aa16.07■□□□□ 0.16
SCAP-213ENST00000494938 GPR182O15218 404 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 UPP2O95045 317 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 XRCC6P12956 609 aaKnown RBP eCLIP16.06■□□□□ 0.16
SCAP-213ENST00000494938 EIF4BP23588 611 aaKnown RBP16.06■□□□□ 0.16
SCAP-213ENST00000494938 DNM2P50570 870 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 CDC42EP1Q00587 391 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 NFX1Q12986 1120 aaKnown RBP16.06■□□□□ 0.16
SCAP-213ENST00000494938 XKR9Q5GH70 373 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 SPRED2Q7Z698 418 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 KSR1Q8IVT5 923 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 PIGOQ8TEQ8 1089 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 TMEM143Q96AN5 459 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 JPH2Q9BR39 696 aaPredicted RBP16.06■□□□□ 0.16
SCAP-213ENST00000494938 FTHL17Q9BXU8 183 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 PRDM12Q9H4Q4 367 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 TUFT1Q9NNX1 390 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 INSL6Q9Y581 213 aa16.06■□□□□ 0.16
SCAP-213ENST00000494938 DARSP14868 501 aaKnown RBP16.05■□□□□ 0.16
SCAP-213ENST00000494938 SYT1P21579 422 aa16.05■□□□□ 0.16
SCAP-213ENST00000494938 RPA1P27694 616 aa16.05■□□□□ 0.16
SCAP-213ENST00000494938 RFC5P40937 340 aa16.05■□□□□ 0.16
SCAP-213ENST00000494938 DSC3Q14574 896 aa16.05■□□□□ 0.16
SCAP-213ENST00000494938 ECM1Q16610 540 aa16.05■□□□□ 0.16
SCAP-213ENST00000494938 FAM43BQ6ZT52 329 aaPredicted RBP16.05■□□□□ 0.16
SCAP-213ENST00000494938 EXOC8Q8IYI6 725 aa16.05■□□□□ 0.16
SCAP-213ENST00000494938 IGSF22Q8N9C0 903 aa16.05■□□□□ 0.16
SCAP-213ENST00000494938 SP7Q8TDD2 431 aaPredicted RBP16.05■□□□□ 0.16
SCAP-213ENST00000494938 PRPF31Q8WWY3 499 aaKnown RBP16.05■□□□□ 0.16
SCAP-213ENST00000494938 XPNPEP1Q9NQW7 623 aa16.05■□□□□ 0.16
SCAP-213ENST00000494938 A0A087WZ62 844 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms