RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 ARHGEF35A5YM69 484 aa19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 MAGEB2O15479 319 aa19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 MAFO75444 373 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 SSBP05455 408 aaKnown RBP eCLIP19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 TXLNAP40222 546 aa19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 DHX8Q14562 1220 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 TAF2Q6P1X5 1199 aa19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 SLC7A3Q8WY07 619 aa19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 TMEM143Q96AN5 459 aa19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 SCLYQ96I15 445 aa19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 ZNF668Q96K58 619 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 WNT8AQ9H1J5 351 aa19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 DHX33Q9H6R0 707 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 POLD4Q9HCU8 107 aa19.92■□□□□ 0.78
PDLIM7-208ENST00000493815 EYA4O95677 639 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 VTNP04004 478 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 BFSP2Q13515 415 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 EMC2Q15006 297 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 RESP18Q5W5W9 173 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 PADI6Q6TGC4 694 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 LINC01465Q8N7H1 131 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 RETREG2Q8NC44 543 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 BLOC1S4Q9NUP1 217 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 IGKV6-21A0A0C4DH24 114 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 SMIM35A0A1B0GVV1 85 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 H0YGN5 161 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 TIMP1P01033 207 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 RRAGBQ5VZM2 374 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 ADALQ6DHV7 355 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 CAGE1Q8TC20 777 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 BADQ92934 168 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 XPNPEP1Q9NQW7 623 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 CCDC39Q9UFE4 941 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 AKT3Q9Y243 479 aa19.91■□□□□ 0.78
PDLIM7-208ENST00000493815 A0A1B0GVL5 298 aa19.9■□□□□ 0.78
PDLIM7-208ENST00000493815 PLA2G4BP0C869 781 aa19.9■□□□□ 0.78
PDLIM7-208ENST00000493815 RFC5P40937 340 aa19.9■□□□□ 0.78
PDLIM7-208ENST00000493815 MDM2Q00987 491 aaPredicted RBP19.9■□□□□ 0.78
PDLIM7-208ENST00000493815 MCM6Q14566 821 aa19.9■□□□□ 0.78
PDLIM7-208ENST00000493815 TRAF7Q6Q0C0 670 aa19.9■□□□□ 0.78
PDLIM7-208ENST00000493815 RUSC1Q9BVN2 902 aa19.9■□□□□ 0.78
PDLIM7-208ENST00000493815 OSBPL7Q9BZF2 842 aa19.9■□□□□ 0.78
PDLIM7-208ENST00000493815 GPRC5CQ9NQ84 441 aa19.9■□□□□ 0.78
PDLIM7-208ENST00000493815 GINS2Q9Y248 185 aa19.9■□□□□ 0.78
PDLIM7-208ENST00000493815 PITPNM1O00562 1244 aa19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 DGAT1O75907 488 aa19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 CHRNA1P02708 482 aa19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 SELPP16109 830 aa19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 TMOD1P28289 359 aa19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 NAALADL2Q58DX5 795 aa19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 LRRC8DQ7L1W4 858 aa19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 KSR1Q8IVT5 923 aa19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 CCDC155Q8N6L0 562 aa19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 RAD54LQ92698 747 aa19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 MTRQ99707 1265 aa19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 CDHR5Q9HBB8 845 aa19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 ATP6V0A4Q9HBG4 840 aa19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 SUCLA2Q9P2R7 463 aaPredicted RBP19.89■□□□□ 0.77
PDLIM7-208ENST00000493815 EVPLQ92817 2033 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 RSPH10B2B2RC85 870 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 SLC26A4O43511 780 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 IQCF3P0C7M6 154 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 RSPH10BP0C881 870 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 CMA1P23946 247 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 STAT6P42226 847 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 SLC12A3P55017 1021 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 RAD51AP2Q09MP3 1159 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 KIZQ2M2Z5 673 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 RSPH3Q86UC2 560 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 DHX58Q96C10 678 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 MAP7D2Q96T17 732 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 FAM13BQ9NYF5 915 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 PPME1Q9Y570 386 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 CDY2AQ9Y6F7 541 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 CEP290O15078 2479 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 ARID2Q68CP9 1835 aa19.88■□□□□ 0.77
PDLIM7-208ENST00000493815 NPHP3-ACAD11A0A0J9YXS1 232 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 POLR2DO15514 142 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 CSF2RAP15509 400 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 PFKFB1P16118 471 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 DNM2P50570 870 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 MRPS6P82932 125 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 RBL2Q08999 1139 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 MBTPS1Q14703 1052 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 RINT1Q6NUQ1 792 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 CCDC73Q6ZRK6 1079 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 RPAINQ86UA6 219 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 RHPN2Q8IUC4 686 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 SYT2Q8N9I0 419 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 GOLPH3LQ9H4A5 285 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 KCNH3Q9ULD8 1083 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 PDE4DIPQ5VU43 2346 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 CYP11B2P19099 503 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 NLRP11P59045 1033 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 MGAT3Q09327 533 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 GPNMBQ14956 572 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 FAM102BQ5T8I3 360 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 MFSD5Q6N075 450 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 DEFB128Q7Z7B8 93 aa19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 FSIP1Q8NA03 581 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms