RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 MSS51Q4VC12 460 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 PRR16Q569H4 304 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 RPS26P11Q5JNZ5 115 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-220ENST00000492859 B3GNT9Q6UX72 402 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 PI16Q6UXB8 463 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 KRT74Q7RTS7 529 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 CEP97Q8IW35 865 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 SYTL1Q8IYJ3 562 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 TSEN2Q8NCE0 465 aaKnown RBP4.63□□□□□ -1.67
BRCA1-220ENST00000492859 MOSPD2Q8NHP6 518 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 CTCFLQ8NI51 663 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-220ENST00000492859 ZNF296Q8WUU4 475 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-220ENST00000492859 ASB12Q8WXK4 309 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 USB1Q9BQ65 265 aaKnown RBP4.63□□□□□ -1.67
BRCA1-220ENST00000492859 TUBA1CQ9BQE3 449 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 RUSC1Q9BVN2 902 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 NT5C1AQ9BXI3 368 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 FOXP3Q9BZS1 431 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 NSRP1Q9H0G5 558 aaKnown RBP4.63□□□□□ -1.67
BRCA1-220ENST00000492859 TRIT1Q9H3H1 467 aaKnown RBP4.63□□□□□ -1.67
BRCA1-220ENST00000492859 GHITMQ9H3K2 345 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 CLSTN2Q9H4D0 955 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 CYP4F12Q9HCS2 524 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 C1orf112Q9NSG2 853 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.63□□□□□ -1.67
BRCA1-220ENST00000492859 TBC1D14Q9P2M4 693 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 AASSQ9UDR5 926 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 TBC1D29Q9UFV1 150 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 DENND2AQ9ULE3 1009 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 CARD8Q9Y2G2 431 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 LRCH1Q9Y2L9 728 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 PRDM2Q13029 1718 aa4.63□□□□□ -1.67
BRCA1-220ENST00000492859 A0A1W2PPH5 198 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 B2RBV5 119 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 POTECB2RU33 542 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 EIF1AYO14602 144 aaKnown RBP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 THAP12O43422 761 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 ADCY3O60266 1144 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 SMPD2O60906 423 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 URI1O94763 535 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 SLITRK3O94933 977 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 SNUPNO95149 360 aaKnown RBP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 TRIM16O95361 564 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 PLATP00750 562 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 SERPINC1P01008 464 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 LTFP02788 710 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 POLR3DP05423 398 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 VIMP08670 466 aaKnown RBP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 MYBP10242 640 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 DNAJB1P25685 340 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 PPM1AP35813 382 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 TCF7P36402 384 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 CCNFP41002 786 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 LIFRP42702 1097 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 MMP16P51512 607 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 TNFAIP2Q03169 654 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 DMPKQ09013 629 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 C17orf67Q0P5P2 114 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 MPP3Q13368 585 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 MTMR2Q13614 643 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 LAMB3Q13751 1172 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 DPYSQ14117 519 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 MAP7Q14244 749 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 PCBP1Q15365 356 aaKnown RBP eCLIP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 PKDCCQ504Y2 493 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 DCAF17Q5H9S7 520 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 AADACL4Q5VUY2 407 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 PTCRAQ6ISU1 281 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 PKN3Q6P5Z2 889 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 SPATA24Q86W54 205 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 BPHLQ86WA6 291 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 FAM114A1Q8IWE2 563 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 CCDC83Q8IWF9 413 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 FAM9CQ8IZT9 166 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 GJD3Q8N144 294 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 OR8H3Q8N146 312 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 TTC39CQ8N584 583 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 SUPT20HQ8NEM7 779 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 NEDD1Q8NHV4 660 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 DIS3LQ8TF46 1054 aaKnown RBP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 DDX1Q92499 740 aaKnown RBP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 TBC1D5Q92609 795 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 SLC10A4Q96EP9 437 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 FUBP3Q96I24 572 aaKnown RBP eCLIP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 ZDHHC15Q96MV8 337 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 AIFM3Q96NN9 605 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 SAMD11Q96NU1 681 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 PPP1R16BQ96T49 567 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 TCF12Q99081 682 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 RSRP1Q9BUV0 290 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 ACAT2Q9BWD1 397 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 STMN4Q9H169 189 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 DNAJC18Q9H819 358 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 UBP1Q9NZI7 540 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 ZSWIM5Q9P217 1185 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 SUCOQ9UBS9 1254 aaKnown RBP4.62□□□□□ -1.67
BRCA1-220ENST00000492859 RSPH14Q9UHP6 348 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 MAP4K5Q9Y4K4 846 aa4.62□□□□□ -1.67
BRCA1-220ENST00000492859 PCDHB9Q9Y5E1 797 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms