RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 GPR182O15218 404 aa13.8□□□□□ -0.2
GPNMB-214ENST00000492858 TDGQ13569 410 aa13.8□□□□□ -0.2
GPNMB-214ENST00000492858 FAM228AQ86W67 206 aa13.8□□□□□ -0.2
GPNMB-214ENST00000492858 ABI1Q8IZP0 508 aa13.8□□□□□ -0.2
GPNMB-214ENST00000492858 LRRC43Q8N309 656 aa13.8□□□□□ -0.2
GPNMB-214ENST00000492858 ACSF2Q96CM8 615 aaPredicted RBP13.8□□□□□ -0.2
GPNMB-214ENST00000492858 PPP1R16BQ96T49 567 aa13.8□□□□□ -0.2
GPNMB-214ENST00000492858 DSCC1Q9BVC3 393 aa13.8□□□□□ -0.2
GPNMB-214ENST00000492858 ELAC1Q9H777 363 aaKnown RBP13.8□□□□□ -0.2
GPNMB-214ENST00000492858 SLC9A2Q9UBY0 812 aa13.8□□□□□ -0.2
GPNMB-214ENST00000492858 DUSP12Q9UNI6 340 aa13.8□□□□□ -0.2
GPNMB-214ENST00000492858 UBIAD1Q9Y5Z9 338 aa13.8□□□□□ -0.2
GPNMB-214ENST00000492858 HOXA2O43364 376 aa13.79□□□□□ -0.2
GPNMB-214ENST00000492858 CXCL14O95715 111 aa13.79□□□□□ -0.2
GPNMB-214ENST00000492858 KLRC1P26715 233 aa13.79□□□□□ -0.2
GPNMB-214ENST00000492858 STAT5BP51692 787 aa13.79□□□□□ -0.2
GPNMB-214ENST00000492858 TMC5Q6UXY8 1006 aa13.79□□□□□ -0.2
GPNMB-214ENST00000492858 PLPPR4Q7Z2D5 763 aa13.79□□□□□ -0.2
GPNMB-214ENST00000492858 KIAA0319LQ8IZA0 1049 aa13.79□□□□□ -0.2
GPNMB-214ENST00000492858 TMEM87AQ8NBN3 555 aa13.79□□□□□ -0.2
GPNMB-214ENST00000492858 RIN2Q8WYP3 895 aaPredicted RBP13.79□□□□□ -0.2
GPNMB-214ENST00000492858 SENP2Q9HC62 589 aa13.79□□□□□ -0.2
GPNMB-214ENST00000492858 JADE2Q9NQC1 790 aa13.79□□□□□ -0.2
GPNMB-214ENST00000492858 DIAPH3Q9NSV4 1193 aa13.79□□□□□ -0.2
GPNMB-214ENST00000492858 RNF19AQ9NV58 838 aa13.79□□□□□ -0.2
GPNMB-214ENST00000492858 DLL3Q9NYJ7 618 aa13.79□□□□□ -0.2
GPNMB-214ENST00000492858 LOXHD1Q8IVV2 1947 aa13.78□□□□□ -0.2
GPNMB-214ENST00000492858 ACACBO00763 2458 aa13.78□□□□□ -0.2
GPNMB-214ENST00000492858 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.78□□□□□ -0.2
GPNMB-214ENST00000492858 IFIT3O14879 490 aaKnown RBP13.78□□□□□ -0.2
GPNMB-214ENST00000492858 EPCAMP16422 314 aa13.78□□□□□ -0.2
GPNMB-214ENST00000492858 RFX1P22670 979 aa13.78□□□□□ -0.2
GPNMB-214ENST00000492858 ACTR2P61160 394 aa13.78□□□□□ -0.2
GPNMB-214ENST00000492858 TROAPQ12815 778 aa13.78□□□□□ -0.2
GPNMB-214ENST00000492858 DSC3Q14574 896 aa13.78□□□□□ -0.2
GPNMB-214ENST00000492858 BMS1Q14692 1282 aaKnown RBP13.78□□□□□ -0.2
GPNMB-214ENST00000492858 KIZQ2M2Z5 673 aa13.78□□□□□ -0.2
GPNMB-214ENST00000492858 OTOP3Q7RTS5 596 aa13.78□□□□□ -0.2
GPNMB-214ENST00000492858 SLC39A11Q8N1S5 342 aa13.78□□□□□ -0.2
GPNMB-214ENST00000492858 FEZF2Q8TBJ5 459 aa13.78□□□□□ -0.2
GPNMB-214ENST00000492858 OSMRQ99650 979 aa13.78□□□□□ -0.2
GPNMB-214ENST00000492858 MAFGO15525 162 aa13.77□□□□□ -0.21
GPNMB-214ENST00000492858 METAP2P50579 478 aaKnown RBP eCLIP13.77□□□□□ -0.21
GPNMB-214ENST00000492858 CRYBB1P53674 252 aaPredicted RBP13.77□□□□□ -0.21
GPNMB-214ENST00000492858 CCDC149Q6ZUS6 474 aa13.77□□□□□ -0.21
GPNMB-214ENST00000492858 CABP7Q86V35 215 aa13.77□□□□□ -0.21
GPNMB-214ENST00000492858 DCLK2Q8N568 766 aa13.77□□□□□ -0.21
GPNMB-214ENST00000492858 RNF169Q8NCN4 708 aa13.77□□□□□ -0.21
GPNMB-214ENST00000492858 AUTS2Q8WXX7 1259 aa13.77□□□□□ -0.21
GPNMB-214ENST00000492858 RUBCNQ92622 972 aa13.77□□□□□ -0.21
GPNMB-214ENST00000492858 RRP36Q96EU6 259 aaKnown RBP13.77□□□□□ -0.21
GPNMB-214ENST00000492858 SDF4Q9BRK5 362 aa13.77□□□□□ -0.21
GPNMB-214ENST00000492858 PSTPIP2Q9H939 334 aa13.77□□□□□ -0.21
GPNMB-214ENST00000492858 KCNK12Q9HB15 430 aa13.77□□□□□ -0.21
GPNMB-214ENST00000492858 SEC63Q9UGP8 760 aaKnown RBP13.77□□□□□ -0.21
GPNMB-214ENST00000492858 ERICH2A1L162 156 aa13.76□□□□□ -0.21
GPNMB-214ENST00000492858 NT5C1B-RDH14C9J2C7 533 aa13.76□□□□□ -0.21
GPNMB-214ENST00000492858 NARSO43776 548 aaKnown RBP13.76□□□□□ -0.21
GPNMB-214ENST00000492858 TRDNQ13061 729 aa13.76□□□□□ -0.21
GPNMB-214ENST00000492858 WTAPQ15007 396 aa13.76□□□□□ -0.21
GPNMB-214ENST00000492858 UBE2SQ16763 222 aa13.76□□□□□ -0.21
GPNMB-214ENST00000492858 RSPO4Q2I0M5 234 aaPredicted RBP13.76□□□□□ -0.21
GPNMB-214ENST00000492858 ZC3H14Q6PJT7 736 aaKnown RBP13.76□□□□□ -0.21
GPNMB-214ENST00000492858 CATIPQ7Z7H3 387 aa13.76□□□□□ -0.21
GPNMB-214ENST00000492858 ECHDC2Q86YB7 292 aa13.76□□□□□ -0.21
GPNMB-214ENST00000492858 VPS52Q8N1B4 723 aa13.76□□□□□ -0.21
GPNMB-214ENST00000492858 TMEM169Q96HH4 297 aa13.76□□□□□ -0.21
GPNMB-214ENST00000492858 SPZ1Q9BXG8 430 aa13.76□□□□□ -0.21
GPNMB-214ENST00000492858 KCNH7Q9NS40 1196 aa13.76□□□□□ -0.21
GPNMB-214ENST00000492858 OTOGLQ3ZCN5 2332 aa13.76□□□□□ -0.21
GPNMB-214ENST00000492858 KRBA1A5PL33 1030 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 SPDYE3A6NKU9 549 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 HBP1O60381 514 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 VTNP04004 478 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 CFHP08603 1231 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 ALDH7A1P49419 539 aaKnown RBP13.75□□□□□ -0.21
GPNMB-214ENST00000492858 SLC26A2P50443 739 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 BCAR1P56945 870 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 CLLU1OSQ5K130 101 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 SPECC1Q5M775 1068 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 GPR149Q86SP6 731 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 SLC22A17Q8WUG5 538 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 LNPKQ9C0E8 428 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 ZBP1Q9H171 429 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 CACNA1GO43497 2377 aa13.75□□□□□ -0.21
GPNMB-214ENST00000492858 NFASCO94856 1347 aa13.74□□□□□ -0.21
GPNMB-214ENST00000492858 BACH1O14867 736 aa13.74□□□□□ -0.21
GPNMB-214ENST00000492858 GPR32O75388 356 aa13.74□□□□□ -0.21
GPNMB-214ENST00000492858 SP9P0CG40 484 aa13.74□□□□□ -0.21
GPNMB-214ENST00000492858 ZSCAN20P17040 1043 aaPredicted RBP13.74□□□□□ -0.21
GPNMB-214ENST00000492858 TBC1D8BQ0IIM8 1120 aa13.74□□□□□ -0.21
GPNMB-214ENST00000492858 HELQQ8TDG4 1101 aa13.74□□□□□ -0.21
GPNMB-214ENST00000492858 MXRA8Q9BRK3 442 aa13.74□□□□□ -0.21
GPNMB-214ENST00000492858 SFXN1Q9H9B4 322 aa13.74□□□□□ -0.21
GPNMB-214ENST00000492858 TBC1D17Q9HA65 648 aa13.74□□□□□ -0.21
GPNMB-214ENST00000492858 IGSF9Q9P2J2 1179 aa13.74□□□□□ -0.21
GPNMB-214ENST00000492858 WNT16Q9UBV4 365 aa13.74□□□□□ -0.21
GPNMB-214ENST00000492858 CA14Q9ULX7 337 aa13.74□□□□□ -0.21
GPNMB-214ENST00000492858 PCDHA6Q9UN73 950 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms