RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 NR1H3Q13133 447 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 ABCB5Q2M3G0 1257 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 KIAA1755Q5JYT7 1200 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 SH2D4BQ5SQS7 431 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 MSL3Q8N5Y2 521 aaKnown RBP22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 ANKS1AQ92625 1134 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 TGS1Q96RS0 853 aaKnown RBP22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 PLEKHG2Q9H7P9 1386 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 CEP95Q96GE4 821 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 FAM84BQ96KN1 310 aaPredicted RBP22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 ETNK1Q9HBU6 452 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 GEMIN8Q9NWZ8 242 aaKnown RBP22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 GGPS1O95749 300 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 SEPT14Q6ZU15 432 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 EPM2AIP1Q7L775 607 aaPredicted RBP22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 PACS2Q86VP3 889 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 INTS13Q9NVM9 706 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 COL9A3Q14050 684 aaPredicted RBP22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 CTTNQ14247 550 aaKnown RBP22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 TTI2Q6NXR4 508 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 CASKIN2Q8WXE0 1202 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 THOC1Q96FV9 657 aaKnown RBP22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 PNMA2Q9UL42 364 aa22.68■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 HOOK2Q96ED9 719 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 SOX5P35711 763 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 HSD17B3P37058 310 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 HSPA9P38646 679 aaKnown RBP22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 EZH2Q15910 746 aaKnown RBP22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 DEPTORQ8TB45 409 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 MORC4Q8TE76 937 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 CAVIN3Q969G5 261 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 NSUN4Q96CB9 384 aaKnown RBP22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 SPDL1Q96EA4 605 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 PRMT1Q99873 361 aaKnown RBP22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 TRIM51Q9BSJ1 452 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 Q9H521 79 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 VCX3AQ9NNX9 186 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 MT-ND3P03897 115 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 MKRN3Q13064 507 aaKnown RBP22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 RCN2Q14257 317 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 C12orf60Q5U649 245 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 CDAN1Q8IWY9 1227 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 BATF3Q9NR55 127 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 PIK3CAP42336 1068 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 ALCAMQ13740 583 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 SBK1Q52WX2 424 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 PPP1R2P3Q6NXS1 205 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 DDX42Q86XP3 938 aaKnown RBP eCLIP22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 DIP2BQ9P265 1576 aa22.67■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 PLS3P13797 630 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 POLR2BP30876 1174 aaKnown RBP22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 POLE2P56282 527 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 CAPRIN2Q6IMN6 1127 aaKnown RBP22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 PFASO15067 1338 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 ESRRAP11474 423 aaPredicted RBP22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 RPUSD2Q8IZ73 545 aaKnown RBP22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 GRAMD1AQ96CP6 724 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 SGSM3Q96HU1 749 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 LRRC37BQ96QE4 947 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 POTEFA5A3E0 1075 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 KRT1P04264 644 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 POTEIP0CG38 1075 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 SNX16P57768 344 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 UBXN2AP68543 259 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 POTEGQ6S5H5 508 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 POTEEQ6S8J3 1075 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 YIPF3Q9GZM5 350 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 PCDHB4Q9Y5E5 795 aa22.66■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 CCT8L1PA6NM43 557 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 H0Y3Z8 333 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 TFRCP02786 760 aaKnown RBP22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 UCHL3P15374 230 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 USP11P51784 963 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 TTBK2Q6IQ55 1244 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 KCNV2Q8TDN2 545 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 WNT8AQ9H1J5 351 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 HNRNPDLO14979 420 aaKnown RBP22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 FTLP02792 175 aaPredicted RBP22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 INTS2Q9H0H0 1204 aaKnown RBP22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 CD248Q9HCU0 757 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 ANGPTL2Q9UKU9 493 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 STXBP3O00186 592 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 CENPUQ71F23 418 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 NEDD1Q8NHV4 660 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 DHX36Q9H2U1 1008 aaKnown RBP22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 STOML1Q9UBI4 398 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 ARL2BPQ9Y2Y0 163 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 PDXKO00764 312 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 PROCA1Q8NCQ7 364 aaPredicted RBP22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 ARMC2Q8NEN0 867 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 SAYSD1Q9NPB0 183 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 COMMD10Q9Y6G5 202 aa22.65■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 WDR91A4D1P6 747 aa22.64■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 ZBED4O75132 1171 aa22.64■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 SPATA21Q7Z572 469 aa22.64■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 PIGOQ8TEQ8 1089 aa22.64■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 CNOT8Q9UFF9 292 aaKnown RBP22.64■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 USP17L15C9J2P7 530 aa22.64■■□□□ 1.22
CHKB-CPT1B-203ENST00000492556 USP17L13C9JLJ4 530 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms