RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PPFIA1Q13136 1202 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 PPIGQ13427 754 aaKnown RBP eCLIP10.49□□□□□ -0.731e-6■■■□□ 19.2
BRCA1-219ENST00000491747 SAFBQ15424 915 aaKnown RBP eCLIP10.49□□□□□ -0.73
BRCA1-219ENST00000491747 ZNF618Q5T7W0 954 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 IL23AQ9NPF7 189 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 SAMM50Q9Y512 469 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 PTPRSQ13332 1948 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 LAMA3Q16787 3333 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 GBF1Q92538 1859 aa10.49□□□□□ -0.73
BRCA1-219ENST00000491747 POTEB3A0JP26 581 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 WDR64B1ANS9 1081 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 ZBTB42B2RXF5 422 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 ZNF862O60290 1169 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 FXR1P51114 621 aaKnown RBP eCLIP10.48□□□□□ -0.73
BRCA1-219ENST00000491747 BFSP2Q13515 415 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 SNW1Q13573 536 aaKnown RBP10.48□□□□□ -0.73
BRCA1-219ENST00000491747 MBTPS1Q14703 1052 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 TCTN1Q2MV58 587 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 FAM160B1Q5W0V3 765 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 PDXDC2PQ6P474 469 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 POTEBQ6S5H4 581 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 ZNF365Q70YC5 407 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 TRMT1LQ7Z2T5 733 aaKnown RBP10.48□□□□□ -0.73
BRCA1-219ENST00000491747 FILIP1Q7Z7B0 1213 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 DEFB128Q7Z7B8 93 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 NOSTRINQ8IVI9 506 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 KIF18AQ8NI77 898 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 CAGE1Q8TC20 777 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 TMEM60Q9H2L4 133 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 KCND1Q9NSA2 647 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 TRPC6Q9Y210 931 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 IGSF9BQ9UPX0 1349 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 MBLAC1A4D2B0 266 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-219ENST00000491747 ME1P48163 572 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 TOB1P50616 345 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-219ENST00000491747 SPIRE1Q08AE8 756 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 DHX8Q14562 1220 aaKnown RBP10.48□□□□□ -0.73
BRCA1-219ENST00000491747 LRRC8DQ7L1W4 858 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 MIER3Q7Z3K6 550 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 RETREG2Q8NC44 543 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 ZNF397Q8NF99 534 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-219ENST00000491747 FAM20AQ96MK3 541 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 USP28Q96RU2 1077 aa10.48□□□□□ -0.73
BRCA1-219ENST00000491747 NAP1L4Q99733 375 aaKnown RBP10.48□□□□□ -0.73
BRCA1-219ENST00000491747 MORC2Q9Y6X9 1032 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-219ENST00000491747 TBX3O15119 743 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 NBNO60934 754 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 STBD1O95210 358 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 GNAT1P11488 350 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 SELPP16109 830 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 SFNP31947 248 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 MCM7P33993 719 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 THPOP40225 353 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 CCZ1BP86790 482 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 CCZ1P86791 482 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-219ENST00000491747 PPP2R5CQ13362 524 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 ZRSR1Q15695 479 aaKnown RBP10.47□□□□□ -0.73
BRCA1-219ENST00000491747 ZNF174Q15697 407 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 DHX40Q8IX18 779 aaKnown RBP10.47□□□□□ -0.73
BRCA1-219ENST00000491747 ENGASEQ8NFI3 743 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 ATP8B4Q8TF62 1192 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 LRCH3Q96II8 777 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 MTMR9Q96QG7 549 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 GOLPH3LQ9H4A5 285 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 IMPACTQ9P2X3 320 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 TUBE1Q9UJT0 475 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 USP27XA6NNY8 438 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 NRDCO43847 1150 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 SLC26A2P50443 739 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 JAK3P52333 1124 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 CCAR2Q8N163 923 aaKnown RBP10.47□□□□□ -0.73
BRCA1-219ENST00000491747 CCDC155Q8N6L0 562 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 FSIP1Q8NA03 581 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 BANK1Q8NDB2 785 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 CXXC1Q9P0U4 656 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-219ENST00000491747 WRAP73Q9P2S5 460 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-219ENST00000491747 TCEAL9Q9UHQ7 104 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 ARID2Q68CP9 1835 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 SZT2Q5T011 3432 aa10.47□□□□□ -0.73
BRCA1-219ENST00000491747 MYH15Q9Y2K3 1946 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 TMEM150BA6NC51 233 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 RRN3P2A6NIE6 340 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 HBP1O60381 514 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 FGBP02675 491 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 CTSHP09668 335 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 ARID5BQ14865 1188 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 CALCRLQ16602 461 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 LRIT3Q3SXY7 679 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 RASIP1Q5U651 963 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 TAF3Q5VWG9 929 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 MTHFD1LQ6UB35 978 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 ZNF771Q7L3S4 317 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-219ENST00000491747 OTOP2Q7RTS6 562 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 KRT222Q8N1A0 295 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 C4orf32Q8N8J7 132 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 DNAJB3Q8WWF6 145 aa10.46□□□□□ -0.73
BRCA1-219ENST00000491747 BBXQ8WY36 941 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-219ENST00000491747 MRPS27Q92552 414 aaKnown RBP10.46□□□□□ -0.73
BRCA1-219ENST00000491747 CHRNA1P02708 482 aa10.46□□□□□ -0.74
BRCA1-219ENST00000491747 KLRC1P26715 233 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms