RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 CCDC188H7C350 402 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 PDXKO00764 312 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 NDUFAB1O14561 156 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 CALUO43852 315 aaPredicted RBP13.4□□□□□ -0.26
FXR1-220ENST00000491062 KRT18P05783 430 aaKnown RBP13.4□□□□□ -0.26
FXR1-220ENST00000491062 PON1P27169 355 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 GUCY2FP51841 1108 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 CASP5P51878 434 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 JAM2P57087 298 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 ARID5AQ03989 594 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 GIT2Q14161 759 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 EPHA7Q15375 998 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 SLFN11Q7Z7L1 901 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 RASGEF1CQ8N431 466 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 SYT2Q8N9I0 419 aaPredicted RBP13.4□□□□□ -0.26
FXR1-220ENST00000491062 LRCH3Q96II8 777 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 SPAG5Q96R06 1193 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 KANSL2Q9H9L4 492 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 TMBIM4Q9HC24 238 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 METTL14Q9HCE5 456 aaKnown RBP13.4□□□□□ -0.26
FXR1-220ENST00000491062 GTPBP10A4D1E9 387 aaKnown RBP13.39□□□□□ -0.27
FXR1-220ENST00000491062 PGRMC1O00264 195 aaKnown RBP13.39□□□□□ -0.27
FXR1-220ENST00000491062 KCNK3O14649 394 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 FLOT1O75955 427 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 GFPT2O94808 682 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 ERLIN2O94905 339 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 ACTN1P12814 892 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 RPA1P27694 616 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 HOXD13P35453 343 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 SLC16A2P36021 539 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 DNA2P51530 1060 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 NPEPPSP55786 919 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 EXOC3L4Q17RC7 722 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 QRICH1Q2TAL8 776 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 Q4G0T1 1027 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 ICE2Q659A1 982 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 SFR1Q86XK3 245 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 TPCN2Q8NHX9 752 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 ERMNQ8TAM6 284 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 DCAF4Q8WV16 495 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 WNT2BQ93097 391 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 LRRC45Q96CN5 670 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 CCDC17Q96LX7 622 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 SIX2Q9NPC8 291 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 TYW1Q9NV66 732 aaKnown RBP13.39□□□□□ -0.27
FXR1-220ENST00000491062 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.39□□□□□ -0.27
FXR1-220ENST00000491062 GGA2Q9UJY4 613 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 PLAAQ9Y263 795 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 STXBP5LQ9Y2K9 1186 aa13.39□□□□□ -0.27
FXR1-220ENST00000491062 H0YGN5 161 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 XRCC5P13010 732 aaKnown RBP13.38□□□□□ -0.27
FXR1-220ENST00000491062 SLC9A1P19634 815 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 STAT3P40763 770 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 ITGB3BPQ13352 177 aaPredicted RBP13.38□□□□□ -0.27
FXR1-220ENST00000491062 PTGISQ16647 500 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 KCTD16Q68DU8 428 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 TTC19Q6DKK2 380 aaPredicted RBP13.38□□□□□ -0.27
FXR1-220ENST00000491062 ALKBH5Q6P6C2 394 aaKnown RBP13.38□□□□□ -0.27
FXR1-220ENST00000491062 MMS22LQ6ZRQ5 1243 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 KCTD1Q719H9 257 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 YTHDF3Q7Z739 585 aaKnown RBP13.38□□□□□ -0.27
FXR1-220ENST00000491062 KLHL7Q8IXQ5 586 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 MICALL1Q8N3F8 863 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 ANKK1Q8NFD2 765 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 CRAMP1Q96RY5 1269 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.38□□□□□ -0.271e-10■■□□□ 12.6
FXR1-220ENST00000491062 COA1Q9GZY4 146 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 SLITRK6Q9H5Y7 841 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 SUCLA2Q9P2R7 463 aaPredicted RBP13.38□□□□□ -0.27
FXR1-220ENST00000491062 NOC2LQ9Y3T9 749 aaKnown RBP13.38□□□□□ -0.27
FXR1-220ENST00000491062 NFS1Q9Y697 457 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 ASTN1O14525 1302 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 NCANO14594 1321 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 NRXN2Q9P2S2 1712 aa13.38□□□□□ -0.27
FXR1-220ENST00000491062 USP17L15C9J2P7 530 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 USP17L13C9JLJ4 530 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 USP17L11C9JVI0 530 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 USP17L18D6R9N7 530 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 USP17L22D6RA61 530 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 USP17L17D6RBQ6 530 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 USP17L19D6RCP7 530 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 USP17L20D6RJB6 530 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 HLA-DOAP06340 250 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 SPATA31C1P0DKV0 1188 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 INPP5BP32019 993 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 MDH1P40925 334 aaKnown RBP13.37□□□□□ -0.27
FXR1-220ENST00000491062 ATP1A2P50993 1020 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 GTF2IP78347 998 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 ARHGAP4P98171 946 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 USP17L24Q0WX57 530 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 NFIL3Q16649 462 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 NAA35Q5VZE5 725 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 USP17L6PQ6QN14 398 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 CATSPER3Q86XQ3 398 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 KCTD17Q8N5Z5 321 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 ARFGAP2Q8N6H7 521 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 METTL13Q8N6R0 699 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 LMBR1Q8WVP7 490 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 SEC14L1Q92503 715 aa13.37□□□□□ -0.27
FXR1-220ENST00000491062 REEP2Q9BRK0 252 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms