RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 SCLT1Q96NL6 688 aa22.27■■□□□ 1.16
SREBF1-216ENST00000490796 RIT2Q99578 217 aa22.27■■□□□ 1.16
SREBF1-216ENST00000490796 LRFN3Q9BTN0 628 aa22.27■■□□□ 1.16
SREBF1-216ENST00000490796 ATP6V0A4Q9HBG4 840 aa22.27■■□□□ 1.16
SREBF1-216ENST00000490796 RGS18Q9NS28 235 aa22.27■■□□□ 1.16
SREBF1-216ENST00000490796 TBKBP1A7MCY6 615 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 MSH4O15457 936 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 MGEA5O60502 916 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 DEXIO95424 95 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 OATP04181 439 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 ITGB1P05556 798 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 CLCN3P51790 818 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 COL19A1Q14993 1142 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 CLUL1Q15846 466 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 EFCAB12Q6NXP0 572 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 FAM228AQ86W67 206 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 ZNF710Q8N1W2 664 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 TBCKQ8TEA7 893 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 LENG9Q96B70 501 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 ZNF274Q96GC6 653 aaPredicted RBP22.26■■□□□ 1.15
SREBF1-216ENST00000490796 PCDHA4Q9UN74 947 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 HCN4Q9Y3Q4 1203 aa22.26■■□□□ 1.15
SREBF1-216ENST00000490796 PI4K2BG5E9Z4 385 aa22.25■■□□□ 1.15
SREBF1-216ENST00000490796 NEFLP07196 543 aa22.25■■□□□ 1.15
SREBF1-216ENST00000490796 ALADP13716 330 aa22.25■■□□□ 1.15
SREBF1-216ENST00000490796 ZSCAN20P17040 1043 aaPredicted RBP22.25■■□□□ 1.15
SREBF1-216ENST00000490796 NDUFV1P49821 464 aa22.25■■□□□ 1.15
SREBF1-216ENST00000490796 NLRP11P59045 1033 aaKnown RBP22.25■■□□□ 1.15
SREBF1-216ENST00000490796 STK3Q13188 491 aa22.25■■□□□ 1.15
SREBF1-216ENST00000490796 TOB2Q14106 344 aaPredicted RBP22.25■■□□□ 1.15
SREBF1-216ENST00000490796 SPPL3Q8TCT6 385 aa22.25■■□□□ 1.15
SREBF1-216ENST00000490796 MICAL1Q8TDZ2 1067 aa22.25■■□□□ 1.15
SREBF1-216ENST00000490796 POF1BQ8WVV4 589 aa22.25■■□□□ 1.15
SREBF1-216ENST00000490796 KHSRPQ92945 711 aaKnown RBP eCLIP22.25■■□□□ 1.15
SREBF1-216ENST00000490796 PRKAG3Q9UGI9 489 aa22.25■■□□□ 1.15
SREBF1-216ENST00000490796 GPR32O75388 356 aa22.24■■□□□ 1.15
SREBF1-216ENST00000490796 PRKCEQ02156 737 aa22.24■■□□□ 1.15
SREBF1-216ENST00000490796 CTC1Q2NKJ3 1217 aa22.24■■□□□ 1.15
SREBF1-216ENST00000490796 MIER3Q7Z3K6 550 aa22.24■■□□□ 1.15
SREBF1-216ENST00000490796 BLIDQ8IZY5 108 aa22.24■■□□□ 1.15
SREBF1-216ENST00000490796 LRRC71Q8N4P6 559 aa22.24■■□□□ 1.15
SREBF1-216ENST00000490796 SLC5A5Q92911 643 aa22.24■■□□□ 1.15
SREBF1-216ENST00000490796 UPF3BQ9BZI7 483 aaKnown RBP22.24■■□□□ 1.15
SREBF1-216ENST00000490796 TM6SF1Q9BZW5 370 aa22.24■■□□□ 1.15
SREBF1-216ENST00000490796 TMEM161AQ9NX61 479 aa22.24■■□□□ 1.15
SREBF1-216ENST00000490796 FAM86C2PA6NEL3 165 aa22.23■■□□□ 1.15
SREBF1-216ENST00000490796 C9IYK1 514 aa22.23■■□□□ 1.15
SREBF1-216ENST00000490796 GPR37L1O60883 481 aa22.23■■□□□ 1.15
SREBF1-216ENST00000490796 LTBRP36941 435 aa22.23■■□□□ 1.15
SREBF1-216ENST00000490796 TBC1D8BQ0IIM8 1120 aa22.23■■□□□ 1.15
SREBF1-216ENST00000490796 FAM102BQ5T8I3 360 aa22.23■■□□□ 1.15
SREBF1-216ENST00000490796 GALNT17Q6IS24 598 aa22.23■■□□□ 1.15
SREBF1-216ENST00000490796 THNSL1Q8IYQ7 743 aa22.23■■□□□ 1.15
SREBF1-216ENST00000490796 ABI1Q8IZP0 508 aa22.23■■□□□ 1.15
SREBF1-216ENST00000490796 LARP6Q9BRS8 491 aaKnown RBP22.23■■□□□ 1.15
SREBF1-216ENST00000490796 UNC45AQ9H3U1 944 aa22.23■■□□□ 1.15
SREBF1-216ENST00000490796 PDRG1Q9NUG6 133 aa22.23■■□□□ 1.15
SREBF1-216ENST00000490796 HOXA2O43364 376 aa22.22■■□□□ 1.15
SREBF1-216ENST00000490796 ZNF862O60290 1169 aa22.22■■□□□ 1.15
SREBF1-216ENST00000490796 DNAJB1P25685 340 aa22.22■■□□□ 1.15
SREBF1-216ENST00000490796 GTF2F1P35269 517 aaKnown RBP eCLIP22.22■■□□□ 1.151e-8■■■■■ 169.5
SREBF1-216ENST00000490796 UBE3AQ05086 875 aa22.22■■□□□ 1.15
SREBF1-216ENST00000490796 CAMK1Q14012 370 aa22.22■■□□□ 1.15
SREBF1-216ENST00000490796 CSPP1Q1MSJ5 1256 aa22.22■■□□□ 1.15
SREBF1-216ENST00000490796 Q4G0T1 1027 aa22.22■■□□□ 1.15
SREBF1-216ENST00000490796 RDM1Q8NG50 284 aa22.22■■□□□ 1.15
SREBF1-216ENST00000490796 FAM122AQ96E09 287 aa22.22■■□□□ 1.15
SREBF1-216ENST00000490796 POP1Q99575 1024 aaKnown RBP22.22■■□□□ 1.15
SREBF1-216ENST00000490796 ELAC1Q9H777 363 aaKnown RBP22.22■■□□□ 1.15
SREBF1-216ENST00000490796 CD207Q9UJ71 328 aa22.22■■□□□ 1.15
SREBF1-216ENST00000490796 CDKL5O76039 1030 aa22.21■■□□□ 1.15
SREBF1-216ENST00000490796 EIF4BP23588 611 aaKnown RBP22.21■■□□□ 1.15
SREBF1-216ENST00000490796 IRS1P35568 1242 aa22.21■■□□□ 1.15
SREBF1-216ENST00000490796 NRIP1P48552 1158 aa22.21■■□□□ 1.15
SREBF1-216ENST00000490796 DLX2Q07687 328 aaPredicted RBP22.21■■□□□ 1.15
SREBF1-216ENST00000490796 ADAM15Q13444 863 aa22.21■■□□□ 1.15
SREBF1-216ENST00000490796 SMAD4Q13485 552 aaKnown RBP22.21■■□□□ 1.15
SREBF1-216ENST00000490796 NONOQ15233 471 aaKnown RBP eCLIP22.21■■□□□ 1.15
SREBF1-216ENST00000490796 RBM23Q86U06 439 aaKnown RBP22.21■■□□□ 1.15
SREBF1-216ENST00000490796 ADHFE1Q8IWW8 467 aa22.21■■□□□ 1.15
SREBF1-216ENST00000490796 FAM177A1Q8N128 213 aaPredicted RBP22.21■■□□□ 1.15
SREBF1-216ENST00000490796 NLRP7Q8WX94 980 aa22.21■■□□□ 1.15
SREBF1-216ENST00000490796 ZNF668Q96K58 619 aaPredicted RBP22.21■■□□□ 1.15
SREBF1-216ENST00000490796 TYW1Q9NV66 732 aaKnown RBP22.21■■□□□ 1.15
SREBF1-216ENST00000490796 SEPT9Q9UHD8 586 aaPredicted RBP22.21■■□□□ 1.15
SREBF1-216ENST00000490796 LINC01565O15544 149 aa22.2■■□□□ 1.14
SREBF1-216ENST00000490796 MBTPS2O43462 519 aa22.2■■□□□ 1.14
SREBF1-216ENST00000490796 TDP2O95551 362 aa22.2■■□□□ 1.14
SREBF1-216ENST00000490796 FGFR1P11362 822 aa22.2■■□□□ 1.14
SREBF1-216ENST00000490796 XBP1P17861 261 aa22.2■■□□□ 1.14
SREBF1-216ENST00000490796 LAG3P18627 525 aa22.2■■□□□ 1.14
SREBF1-216ENST00000490796 DNM2P50570 870 aa22.2■■□□□ 1.14
SREBF1-216ENST00000490796 ZP2Q05996 745 aa22.2■■□□□ 1.14
SREBF1-216ENST00000490796 SMAD2Q15796 467 aaKnown RBP22.2■■□□□ 1.14
SREBF1-216ENST00000490796 UGCGQ16739 394 aa22.2■■□□□ 1.14
SREBF1-216ENST00000490796 XKR3Q5GH77 459 aa22.2■■□□□ 1.14
SREBF1-216ENST00000490796 KRT25Q7Z3Z0 450 aa22.2■■□□□ 1.14
SREBF1-216ENST00000490796 RNF169Q8NCN4 708 aa22.2■■□□□ 1.14
SREBF1-216ENST00000490796 GJA10Q969M2 543 aa22.2■■□□□ 1.14
SREBF1-216ENST00000490796 TLE6Q9H808 572 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms