RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 CDHR1Q96JP9 859 aa10□□□□□ -0.81
SKAP2-207ENST00000490456 IRF2BPLQ9H1B7 796 aa10□□□□□ -0.81
SKAP2-207ENST00000490456 PKD2L1Q9P0L9 805 aa10□□□□□ -0.81
SKAP2-207ENST00000490456 SPTBN4Q9H254 2564 aa10□□□□□ -0.81
SKAP2-207ENST00000490456 COL4A6Q14031 1691 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 A6NJR5 290 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 MEIS1O00470 390 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 NCK2O43639 380 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 GGPS1O95749 300 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 ARP10275 920 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 SLC19A1P41440 591 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 USP11P51784 963 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 SETQ01105 290 aaPredicted RBP9.99□□□□□ -0.81
SKAP2-207ENST00000490456 SP2Q02086 613 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 RBL2Q08999 1139 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 NEDD9Q14511 834 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 SMAD2Q15796 467 aaKnown RBP9.99□□□□□ -0.81
SKAP2-207ENST00000490456 LETM2Q2VYF4 491 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 PRR16Q569H4 304 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 CELF3Q5SZQ8 465 aaKnown RBP9.99□□□□□ -0.81
SKAP2-207ENST00000490456 MCTP1Q6DN14 999 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 EP400NLQ6ZTU2 488 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 NEK8Q86SG6 692 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 PLA2G4DQ86XP0 818 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 DHX37Q8IY37 1157 aaKnown RBP9.99□□□□□ -0.81
SKAP2-207ENST00000490456 SPRYD3Q8NCJ5 442 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 C17orf80Q9BSJ5 609 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 FOXP1Q9H334 677 aaPredicted RBP9.99□□□□□ -0.81
SKAP2-207ENST00000490456 NSUN3Q9H649 340 aaKnown RBP9.99□□□□□ -0.81
SKAP2-207ENST00000490456 MLXIPQ9HAP2 919 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 KCNH7Q9NS40 1196 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 MUTYHQ9UIF7 546 aa9.99□□□□□ -0.81
SKAP2-207ENST00000490456 IGLV3-22A0A075B6J6 115 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 H3BNC9 293 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 MAFGO15525 162 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 EDIL3O43854 480 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 CCNT1O60563 726 aaKnown RBP9.98□□□□□ -0.81
SKAP2-207ENST00000490456 ATP9AO75110 1047 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 DGAT1O75907 488 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 TDP2O95551 362 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 PDCP20941 246 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 CIITAP33076 1130 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 SP4Q02446 784 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 ARHGAP1Q07960 439 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 TCF15Q12870 199 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 LAMC2Q13753 1193 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 BECN1Q14457 450 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 GPNMBQ14956 572 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 TCEAL5Q5H9L2 206 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 SWT1Q5T5J6 900 aaKnown RBP9.98□□□□□ -0.81
SKAP2-207ENST00000490456 CYFIP1Q7L576 1253 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 NIPA1Q7RTP0 329 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 SESTD1Q86VW0 696 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 RNF135Q8IUD6 432 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 NOSTRINQ8IVI9 506 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 AFG1LQ8WV93 481 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 PBXIP1Q96AQ6 731 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 SPATA33Q96N06 139 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 SENP7Q9BQF6 1050 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 BCAS3Q9H6U6 928 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 AGO4Q9HCK5 861 aaKnown RBP9.98□□□□□ -0.81
SKAP2-207ENST00000490456 CLDND1Q9NY35 253 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 PCDHB3Q9Y5E6 796 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 PLXNA3P51805 1871 aa9.98□□□□□ -0.81
SKAP2-207ENST00000490456 VPS37CA5D8V6 355 aaPredicted RBP9.97□□□□□ -0.81
SKAP2-207ENST00000490456 TMEM221A6NGB7 291 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 C3orf80F5H4A9 247 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 M0R296 226 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 NOP56O00567 594 aaKnown RBP9.97□□□□□ -0.81
SKAP2-207ENST00000490456 NBNO60934 754 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 AMHP03971 560 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 MMP3P08254 477 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 KCNA2P16389 499 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 ATP2B1P20020 1258 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 HTRA4P83105 476 aaPredicted RBP9.97□□□□□ -0.81
SKAP2-207ENST00000490456 ITGB3BPQ13352 177 aaPredicted RBP9.97□□□□□ -0.81
SKAP2-207ENST00000490456 GPM6BQ13491 265 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 E2F4Q16254 413 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 Q4G0T1 1027 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 EPC2Q52LR7 807 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 MYSM1Q5VVJ2 828 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 FAM117BQ6P1L5 589 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 METTL7BQ6UX53 244 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 TRIM67Q6ZTA4 783 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 ERMP1Q7Z2K6 904 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 GIMAP8Q8ND71 665 aaPredicted RBP9.97□□□□□ -0.81
SKAP2-207ENST00000490456 PPTC7Q8NI37 304 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 PPP1R13LQ8WUF5 828 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 EMID1Q96A84 441 aaPredicted RBP9.97□□□□□ -0.81
SKAP2-207ENST00000490456 LENG9Q96B70 501 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 NAP1L4Q99733 375 aaKnown RBP9.97□□□□□ -0.81
SKAP2-207ENST00000490456 SDF4Q9BRK5 362 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 ZNF577Q9BSK1 485 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 WDR70Q9NW82 654 aa9.97□□□□□ -0.81
SKAP2-207ENST00000490456 DDX25Q9UHL0 483 aaKnown RBP9.97□□□□□ -0.81
SKAP2-207ENST00000490456 ZFHX2Q9C0A1 2572 aaPredicted RBP9.97□□□□□ -0.81
SKAP2-207ENST00000490456 BAZ2BQ9UIF8 2168 aaKnown RBP9.97□□□□□ -0.81
SKAP2-207ENST00000490456 CYP3A7-CYP3A51PA0A087WV96 503 aa9.96□□□□□ -0.82
SKAP2-207ENST00000490456 DDX39AO00148 427 aaKnown RBP9.96□□□□□ -0.82
SKAP2-207ENST00000490456 IPO5O00410 1097 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms