RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 QARSP47897 775 aaKnown RBP19.59■□□□□ 0.73
SEC13-218ENST00000490283 NLRP11P59045 1033 aaKnown RBP19.59■□□□□ 0.73
SEC13-218ENST00000490283 BTG3Q14201 252 aaPredicted RBP19.59■□□□□ 0.73
SEC13-218ENST00000490283 EPC2Q52LR7 807 aa19.59■□□□□ 0.73
SEC13-218ENST00000490283 TJAP1Q5JTD0 557 aa19.59■□□□□ 0.73
SEC13-218ENST00000490283 TMEM192Q8IY95 271 aa19.59■□□□□ 0.73
SEC13-218ENST00000490283 FAM184AQ8NB25 1140 aa19.59■□□□□ 0.73
SEC13-218ENST00000490283 C8orf76Q96K31 380 aa19.59■□□□□ 0.73
SEC13-218ENST00000490283 JPH2Q9BR39 696 aaPredicted RBP19.59■□□□□ 0.73
SEC13-218ENST00000490283 NIFKQ9BYG3 293 aaKnown RBP19.59■□□□□ 0.73
SEC13-218ENST00000490283 CDHR5Q9HBB8 845 aa19.59■□□□□ 0.73
SEC13-218ENST00000490283 ERVK-5Q9HDB9 667 aa19.59■□□□□ 0.73
SEC13-218ENST00000490283 PRDM6Q9NQX0 595 aa19.59■□□□□ 0.73
SEC13-218ENST00000490283 C1orf112Q9NSG2 853 aa19.59■□□□□ 0.73
SEC13-218ENST00000490283 VAV3Q9UKW4 847 aa19.59■□□□□ 0.73
SEC13-218ENST00000490283 ST3GAL5Q9UNP4 418 aa19.59■□□□□ 0.73
SEC13-218ENST00000490283 MYH9P35579 1960 aaKnown RBP19.59■□□□□ 0.73
SEC13-218ENST00000490283 COL4A6Q14031 1691 aa19.59■□□□□ 0.73
SEC13-218ENST00000490283 SIP14410 1827 aa19.58■□□□□ 0.73
SEC13-218ENST00000490283 LPXNO60711 386 aa19.58■□□□□ 0.72
SEC13-218ENST00000490283 GPR32O75388 356 aa19.58■□□□□ 0.72
SEC13-218ENST00000490283 P4HBP07237 508 aaKnown RBP19.58■□□□□ 0.72
SEC13-218ENST00000490283 IBSPP21815 317 aaPredicted RBP19.58■□□□□ 0.72
SEC13-218ENST00000490283 CTNNB1P35222 781 aa19.58■□□□□ 0.72
SEC13-218ENST00000490283 RBM25P49756 843 aaKnown RBP19.58■□□□□ 0.72
SEC13-218ENST00000490283 MRPS5P82675 430 aaKnown RBP19.58■□□□□ 0.72
SEC13-218ENST00000490283 CDC42EP1Q00587 391 aa19.58■□□□□ 0.72
SEC13-218ENST00000490283 RABEP1Q15276 862 aa19.58■□□□□ 0.72
SEC13-218ENST00000490283 CALCRLQ16602 461 aa19.58■□□□□ 0.72
SEC13-218ENST00000490283 AAK1Q2M2I8 961 aa19.58■□□□□ 0.72
SEC13-218ENST00000490283 EARS2Q5JPH6 523 aaKnown RBP19.58■□□□□ 0.72
SEC13-218ENST00000490283 NCAPH2Q6IBW4 605 aa19.58■□□□□ 0.72
SEC13-218ENST00000490283 LINC01465Q8N7H1 131 aa19.58■□□□□ 0.72
SEC13-218ENST00000490283 TMEM40Q8WWA1 233 aa19.58■□□□□ 0.72
SEC13-218ENST00000490283 NLRP7Q8WX94 980 aa19.58■□□□□ 0.72
SEC13-218ENST00000490283 LINC01599Q8WXQ3 324 aa19.58■□□□□ 0.72
SEC13-218ENST00000490283 TNFRSF25Q93038 417 aa19.58■□□□□ 0.72
SEC13-218ENST00000490283 FAM205CA6NFA0 338 aa19.57■□□□□ 0.72
SEC13-218ENST00000490283 EML1O00423 815 aa19.57■□□□□ 0.72
SEC13-218ENST00000490283 ST18O60284 1047 aa19.57■□□□□ 0.72
SEC13-218ENST00000490283 NEMFO60524 1076 aa19.57■□□□□ 0.72
SEC13-218ENST00000490283 DGKIO75912 1065 aa19.57■□□□□ 0.72
SEC13-218ENST00000490283 SARSP49591 514 aaKnown RBP19.57■□□□□ 0.72
SEC13-218ENST00000490283 ST3GAL1Q11201 340 aa19.57■□□□□ 0.72
SEC13-218ENST00000490283 GPM6BQ13491 265 aa19.57■□□□□ 0.72
SEC13-218ENST00000490283 GNL2Q13823 731 aaKnown RBP19.57■□□□□ 0.72
SEC13-218ENST00000490283 EPHA7Q15375 998 aa19.57■□□□□ 0.72
SEC13-218ENST00000490283 TARBP2Q15633 366 aaKnown RBP19.57■□□□□ 0.72
SEC13-218ENST00000490283 EXOC8Q8IYI6 725 aa19.57■□□□□ 0.72
SEC13-218ENST00000490283 CMTR2Q8IYT2 770 aaKnown RBP19.57■□□□□ 0.72
SEC13-218ENST00000490283 HAS1Q92839 578 aa19.57■□□□□ 0.72
SEC13-218ENST00000490283 ADAM2Q99965 735 aa19.57■□□□□ 0.72
SEC13-218ENST00000490283 COL25A1Q9BXS0 654 aaPredicted RBP19.57■□□□□ 0.72
SEC13-218ENST00000490283 TMX1Q9H3N1 280 aa19.57■□□□□ 0.72
SEC13-218ENST00000490283 PCDHB7Q9Y5E2 793 aa19.57■□□□□ 0.72
SEC13-218ENST00000490283 RB1P06400 928 aa19.56■□□□□ 0.72
SEC13-218ENST00000490283 ZSCAN20P17040 1043 aaPredicted RBP19.56■□□□□ 0.72
SEC13-218ENST00000490283 GUCY1B3Q02153 619 aa19.56■□□□□ 0.72
SEC13-218ENST00000490283 SLC24A5Q71RS6 500 aa19.56■□□□□ 0.72
SEC13-218ENST00000490283 RTN4RL1Q86UN2 441 aaPredicted RBP19.56■□□□□ 0.72
SEC13-218ENST00000490283 FAM228AQ86W67 206 aa19.56■□□□□ 0.72
SEC13-218ENST00000490283 C11orf84Q9BUA3 381 aaPredicted RBP19.56■□□□□ 0.72
SEC13-218ENST00000490283 RGS18Q9NS28 235 aa19.56■□□□□ 0.72
SEC13-218ENST00000490283 PCDHA12Q9UN75 941 aa19.56■□□□□ 0.72
SEC13-218ENST00000490283 COG5Q9UP83 839 aa19.56■□□□□ 0.72
SEC13-218ENST00000490283 PPME1Q9Y570 386 aa19.56■□□□□ 0.72
SEC13-218ENST00000490283 H3BNC9 293 aa19.55■□□□□ 0.72
SEC13-218ENST00000490283 EIF4BP23588 611 aaKnown RBP19.55■□□□□ 0.72
SEC13-218ENST00000490283 GPC3P51654 580 aa19.55■□□□□ 0.72
SEC13-218ENST00000490283 OTUD6AQ7L8S5 288 aa19.55■□□□□ 0.72
SEC13-218ENST00000490283 SLC7A3Q8WY07 619 aa19.55■□□□□ 0.72
SEC13-218ENST00000490283 ZNF689Q96CS4 500 aaPredicted RBP19.55■□□□□ 0.72
SEC13-218ENST00000490283 MRPL38Q96DV4 380 aaKnown RBP19.55■□□□□ 0.72
SEC13-218ENST00000490283 ASB2Q96Q27 587 aa19.55■□□□□ 0.72
SEC13-218ENST00000490283 KIF2CQ99661 725 aa19.55■□□□□ 0.72
SEC13-218ENST00000490283 LXNQ9BS40 222 aa19.55■□□□□ 0.72
SEC13-218ENST00000490283 GCOM2Q9BZD3 368 aaPredicted RBP19.55■□□□□ 0.72
SEC13-218ENST00000490283 ADAMTS10Q9H324 1103 aa19.55■□□□□ 0.72
SEC13-218ENST00000490283 RC3H2Q9HBD1 1191 aaKnown RBP19.55■□□□□ 0.72
SEC13-218ENST00000490283 KIF3AQ9Y496 699 aa19.55■□□□□ 0.72
SEC13-218ENST00000490283 TMEM150BA6NC51 233 aa19.54■□□□□ 0.72
SEC13-218ENST00000490283 BMPR1AP36894 532 aa19.54■□□□□ 0.72
SEC13-218ENST00000490283 POLGP54098 1239 aaPredicted RBP19.54■□□□□ 0.72
SEC13-218ENST00000490283 PAN2Q504Q3 1202 aaKnown RBP19.54■□□□□ 0.72
SEC13-218ENST00000490283 TIGD5Q53EQ6 642 aa19.54■□□□□ 0.72
SEC13-218ENST00000490283 PLA2G4FQ68DD2 849 aa19.54■□□□□ 0.72
SEC13-218ENST00000490283 ANO5Q75V66 913 aa19.54■□□□□ 0.72
SEC13-218ENST00000490283 C4orf19Q8IY42 314 aa19.54■□□□□ 0.72
SEC13-218ENST00000490283 HLA-CQ95604 372 aa19.54■□□□□ 0.72
SEC13-218ENST00000490283 CEP170P1Q96L14 293 aa19.54■□□□□ 0.72
SEC13-218ENST00000490283 CCDC43Q96MW1 224 aaKnown RBP19.54■□□□□ 0.72
SEC13-218ENST00000490283 SH2D3AQ9BRG2 576 aa19.54■□□□□ 0.72
SEC13-218ENST00000490283 INO80BQ9C086 356 aaPredicted RBP19.54■□□□□ 0.72
SEC13-218ENST00000490283 ZSWIM4Q9H7M6 989 aa19.54■□□□□ 0.72
SEC13-218ENST00000490283 CYP26B1Q9NR63 512 aa19.54■□□□□ 0.72
SEC13-218ENST00000490283 SUCLA2Q9P2R7 463 aaPredicted RBP19.54■□□□□ 0.72
SEC13-218ENST00000490283 COL4A4P53420 1690 aaPredicted RBP19.54■□□□□ 0.72
SEC13-218ENST00000490283 CHD7Q9P2D1 2997 aa19.54■□□□□ 0.72
SEC13-218ENST00000490283 C5orf67F2Z3F1 127 aa19.53■□□□□ 0.72
SEC13-218ENST00000490283 MGEA5O60502 916 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms