RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CYP11B2P19099 503 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 TRIM21P19474 475 aaKnown RBP9.34□□□□□ -0.91
VTI1A-207ENST00000489357 HMGCS2P54868 508 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 SLC12A3P55017 1021 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 GNG11P61952 73 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 COASYQ13057 564 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 CRHR2Q13324 411 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 PPP2R5CQ13362 524 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 GLIPR1L2Q4G1C9 344 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 VWA3BQ502W6 1294 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 ARHGAP29Q52LW3 1261 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 MIIPQ5JXC2 388 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 TREML2Q5T2D2 321 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 LYPD8Q6UX82 237 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 TOGARAM2Q6ZUX3 1019 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 MCF2L2Q86YR7 1114 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 BANK1Q8NDB2 785 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 MNS1Q8NEH6 495 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 SYN2Q92777 582 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-207ENST00000489357 LENG9Q96B70 501 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 PLIN2Q99541 437 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 CCDC94Q9BW85 323 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-207ENST00000489357 TSGA10Q9BZW7 698 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 NDST4Q9H3R1 872 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 SEMA6BQ9H3T3 888 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 SEL1LQ9UBV2 794 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 ZNF215Q9UL58 517 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-207ENST00000489357 MAPK8IP1Q9UQF2 711 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 DAAM1Q9Y4D1 1078 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 SMCHD1A6NHR9 2005 aa9.34□□□□□ -0.91
VTI1A-207ENST00000489357 UBE4BO95155 1302 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 ZNFX1Q9P2E3 1918 aaKnown RBP9.33□□□□□ -0.92
VTI1A-207ENST00000489357 RBBP6Q7Z6E9 1792 aaKnown RBP9.33□□□□□ -0.92
VTI1A-207ENST00000489357 IGLV3-22A0A075B6J6 115 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 TTC26A0AVF1 554 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 SOWAHDA6NJG2 315 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 EIF3CLB5ME19 914 aaKnown RBP9.33□□□□□ -0.92
VTI1A-207ENST00000489357 OPLAHO14841 1288 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 WDR46O15213 610 aaKnown RBP9.33□□□□□ -0.92
VTI1A-207ENST00000489357 NDUFA10O95299 355 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 EYA4O95677 639 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 FCER1AP12319 257 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 IDEP14735 1019 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 USP14P54578 494 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 CAP1Q01518 475 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 DGKZQ13574 1117 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 NFIL3Q16649 462 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 BMT2Q1RMZ1 405 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 PRR16Q569H4 304 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 RAD9BQ6WBX8 426 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 LBX2Q6XYB7 198 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 CATSPERGQ6ZRH7 1159 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 LRRC55Q6ZSA7 311 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 STXBP4Q6ZWJ1 553 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 PRPF38AQ8NAV1 312 aaKnown RBP9.33□□□□□ -0.92
VTI1A-207ENST00000489357 UBXN4Q92575 508 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 KIFC2Q96AC6 838 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 RIT2Q99578 217 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 EIF3CQ99613 913 aaKnown RBP9.33□□□□□ -0.92
VTI1A-207ENST00000489357 ZFYVE28Q9HCC9 887 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 SLC39A2Q9NP94 309 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 OLFML3Q9NRN5 406 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 ARGLU1Q9NWB6 273 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-207ENST00000489357 ADAMTS5Q9UNA0 930 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 PLAGL2Q9UPG8 496 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 KIAA1024Q9UPX6 916 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 TRAF3IP3Q9Y228 551 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 COL4A3BPQ9Y5P4 624 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 MRFAP1Q9Y605 127 aa9.33□□□□□ -0.92
VTI1A-207ENST00000489357 EPN1Q9Y6I3 576 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-207ENST00000489357 COL11A1P12107 1806 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-207ENST00000489357 CTAGE9A4FU28 777 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 B4DLN1 442 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 RNF223E7ERA6 249 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 FAM86B1E9PN63 330 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 PDXKO00764 312 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 EIF3DO15371 548 aaKnown RBP eCLIP9.32□□□□□ -0.92
VTI1A-207ENST00000489357 ATP8B1O43520 1251 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 KRT86O43790 486 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 RAD21O60216 631 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 URI1O94763 535 aaPredicted RBP9.32□□□□□ -0.92
VTI1A-207ENST00000489357 ICAM1P05362 532 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 FAM86B2P0C5J1 330 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 RPL13P26373 211 aaKnown RBP9.32□□□□□ -0.92
VTI1A-207ENST00000489357 ANXA13P27216 316 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 ZNF76P36508 570 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 HSD17B4P51659 736 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 TAF1CQ15572 869 aaPredicted RBP9.32□□□□□ -0.92
VTI1A-207ENST00000489357 PTPRNQ16849 979 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 XRRA1Q6P2D8 792 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 DYMQ7RTS9 669 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 GPBP1Q86WP2 473 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 CATSPER3Q86XQ3 398 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 FMNL3Q8IVF7 1028 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 CEP112Q8N8E3 955 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 ZNF296Q8WUU4 475 aaPredicted RBP9.32□□□□□ -0.92
VTI1A-207ENST00000489357 CPLX3Q8WVH0 158 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 SLC5A5Q92911 643 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 RPGRIP1Q96KN7 1286 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 NUDT12Q9BQG2 462 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms