RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 POU3F3P20264 500 aaPredicted RBP26.9■■□□□ 1.9
PTPN18-213ENST00000489215 IGFBP4P22692 258 aa26.9■■□□□ 1.9
PTPN18-213ENST00000489215 CLCN3P51790 818 aa26.9■■□□□ 1.9
PTPN18-213ENST00000489215 NFX1Q12986 1120 aaKnown RBP26.9■■□□□ 1.9
PTPN18-213ENST00000489215 KIZQ2M2Z5 673 aa26.9■■□□□ 1.9
PTPN18-213ENST00000489215 SP7Q8TDD2 431 aaPredicted RBP26.9■■□□□ 1.9
PTPN18-213ENST00000489215 MTMR9Q96QG7 549 aa26.9■■□□□ 1.9
PTPN18-213ENST00000489215 TSPYL2Q9H2G4 693 aaPredicted RBP26.9■■□□□ 1.9
PTPN18-213ENST00000489215 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.9■■□□□ 1.9
PTPN18-213ENST00000489215 VTNP04004 478 aa26.89■■□□□ 1.9
PTPN18-213ENST00000489215 TXKP42681 527 aa26.89■■□□□ 1.9
PTPN18-213ENST00000489215 NLRP11P59045 1033 aaKnown RBP26.89■■□□□ 1.9
PTPN18-213ENST00000489215 ERVK-21P61565 698 aa26.89■■□□□ 1.9
PTPN18-213ENST00000489215 SPIRE1Q08AE8 756 aa26.89■■□□□ 1.9
PTPN18-213ENST00000489215 ANO5Q75V66 913 aa26.89■■□□□ 1.9
PTPN18-213ENST00000489215 ARNTL2Q8WYA1 636 aa26.89■■□□□ 1.9
PTPN18-213ENST00000489215 BACH2Q9BYV9 841 aa26.89■■□□□ 1.9
PTPN18-213ENST00000489215 CYP26B1Q9NR63 512 aa26.89■■□□□ 1.9
PTPN18-213ENST00000489215 TTC3P53804 2025 aa26.89■■□□□ 1.89
PTPN18-213ENST00000489215 IGKV6-21A0A0C4DH24 114 aa26.88■■□□□ 1.89
PTPN18-213ENST00000489215 LCHNA4D1U4 455 aa26.88■■□□□ 1.89
PTPN18-213ENST00000489215 LINC01553A4QN01 128 aa26.88■■□□□ 1.89
PTPN18-213ENST00000489215 MAFO75444 373 aaPredicted RBP26.88■■□□□ 1.89
PTPN18-213ENST00000489215 U2AF2P26368 475 aaKnown RBP eCLIP26.88■■□□□ 1.894e-7■■■■□ 26
PTPN18-213ENST00000489215 MCM7P33993 719 aa26.88■■□□□ 1.89
PTPN18-213ENST00000489215 LRRC71Q8N4P6 559 aa26.88■■□□□ 1.89
PTPN18-213ENST00000489215 SLC7A3Q8WY07 619 aa26.88■■□□□ 1.89
PTPN18-213ENST00000489215 LXNQ9BS40 222 aa26.88■■□□□ 1.89
PTPN18-213ENST00000489215 ERVK-5Q9HDB9 667 aa26.88■■□□□ 1.89
PTPN18-213ENST00000489215 C1orf112Q9NSG2 853 aa26.88■■□□□ 1.89
PTPN18-213ENST00000489215 NOC2LQ9Y3T9 749 aaKnown RBP26.88■■□□□ 1.89
PTPN18-213ENST00000489215 COL4A6Q14031 1691 aa26.87■■□□□ 1.89
PTPN18-213ENST00000489215 GAS2O43903 313 aaKnown RBP26.87■■□□□ 1.89
PTPN18-213ENST00000489215 ATP2B1P20020 1258 aa26.87■■□□□ 1.89
PTPN18-213ENST00000489215 EIF4BP23588 611 aaKnown RBP26.87■■□□□ 1.89
PTPN18-213ENST00000489215 RFC5P40937 340 aa26.87■■□□□ 1.89
PTPN18-213ENST00000489215 CEP170P1Q96L14 293 aa26.87■■□□□ 1.89
PTPN18-213ENST00000489215 CEP89Q96ST8 783 aa26.87■■□□□ 1.89
PTPN18-213ENST00000489215 OSMRQ99650 979 aa26.87■■□□□ 1.89
PTPN18-213ENST00000489215 INO80BQ9C086 356 aaPredicted RBP26.87■■□□□ 1.89
PTPN18-213ENST00000489215 CDHR5Q9HBB8 845 aa26.87■■□□□ 1.89
PTPN18-213ENST00000489215 LMCD1Q9NZU5 365 aa26.87■■□□□ 1.89
PTPN18-213ENST00000489215 ST3GAL5Q9UNP4 418 aa26.87■■□□□ 1.89
PTPN18-213ENST00000489215 DENND3A2RUS2 1198 aa26.86■■□□□ 1.89
PTPN18-213ENST00000489215 YWHABP31946 246 aaKnown RBP26.86■■□□□ 1.89
PTPN18-213ENST00000489215 GPC3P51654 580 aa26.86■■□□□ 1.89
PTPN18-213ENST00000489215 NPAS4Q8IUM7 802 aa26.86■■□□□ 1.89
PTPN18-213ENST00000489215 DYDC2Q96IM9 177 aa26.86■■□□□ 1.89
PTPN18-213ENST00000489215 SCLT1Q96NL6 688 aa26.86■■□□□ 1.89
PTPN18-213ENST00000489215 EIF2AK1Q9BQI3 630 aaKnown RBP26.86■■□□□ 1.89
PTPN18-213ENST00000489215 ADAMTS10Q9H324 1103 aa26.86■■□□□ 1.89
PTPN18-213ENST00000489215 CERS4Q9HA82 394 aa26.86■■□□□ 1.89
PTPN18-213ENST00000489215 RWDD3Q9Y3V2 267 aa26.86■■□□□ 1.89
PTPN18-213ENST00000489215 SLITRK3O94933 977 aa26.85■■□□□ 1.89
PTPN18-213ENST00000489215 LYPLA2O95372 231 aa26.85■■□□□ 1.89
PTPN18-213ENST00000489215 ADGRE1Q14246 886 aa26.85■■□□□ 1.89
PTPN18-213ENST00000489215 TMEM266Q2M3C6 531 aa26.85■■□□□ 1.89
PTPN18-213ENST00000489215 TTC38Q5R3I4 469 aa26.85■■□□□ 1.89
PTPN18-213ENST00000489215 TPH2Q8IWU9 490 aa26.85■■□□□ 1.89
PTPN18-213ENST00000489215 TMEM40Q8WWA1 233 aa26.85■■□□□ 1.89
PTPN18-213ENST00000489215 NLRP7Q8WX94 980 aa26.85■■□□□ 1.89
PTPN18-213ENST00000489215 HSD17B14Q9BPX1 270 aa26.85■■□□□ 1.89
PTPN18-213ENST00000489215 GCOM2Q9BZD3 368 aaPredicted RBP26.85■■□□□ 1.89
PTPN18-213ENST00000489215 RGS18Q9NS28 235 aa26.85■■□□□ 1.89
PTPN18-213ENST00000489215 RGL1Q9NZL6 768 aa26.85■■□□□ 1.89
PTPN18-213ENST00000489215 LRFN2Q9ULH4 789 aa26.85■■□□□ 1.89
PTPN18-213ENST00000489215 SMC3Q9UQE7 1217 aa26.85■■□□□ 1.89
PTPN18-213ENST00000489215 XRCC6P12956 609 aaKnown RBP eCLIP26.84■■□□□ 1.89
PTPN18-213ENST00000489215 ZSCAN20P17040 1043 aaPredicted RBP26.84■■□□□ 1.89
PTPN18-213ENST00000489215 POLGP54098 1239 aaPredicted RBP26.84■■□□□ 1.89
PTPN18-213ENST00000489215 SLC24A5Q71RS6 500 aa26.84■■□□□ 1.89
PTPN18-213ENST00000489215 RTN4RL1Q86UN2 441 aaPredicted RBP26.84■■□□□ 1.89
PTPN18-213ENST00000489215 ZNF410Q86VK4 478 aa26.84■■□□□ 1.89
PTPN18-213ENST00000489215 FIBCD1Q8N539 461 aa26.84■■□□□ 1.89
PTPN18-213ENST00000489215 TCP11Q8WWU5 503 aa26.84■■□□□ 1.89
PTPN18-213ENST00000489215 COL6A3P12111 3177 aa26.84■■□□□ 1.89
PTPN18-213ENST00000489215 CHD9Q3L8U1 2897 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 H3BQV1 296 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 DGKIO75912 1065 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 ARHGEF15O94989 841 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 OR52Z1P0C646 297 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 GJB2P29033 226 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 SARSP49591 514 aaKnown RBP26.83■■□□□ 1.89
PTPN18-213ENST00000489215 CYP4A11Q02928 519 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 CTTNQ14247 550 aaKnown RBP26.83■■□□□ 1.89
PTPN18-213ENST00000489215 ZNF174Q15697 407 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 FAM228AQ86W67 206 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 ERMNQ8TAM6 284 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 PPP1R16BQ96T49 567 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 ADAM2Q99965 735 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 TMX1Q9H3N1 280 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 ANKEF1Q9NU02 776 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 SUCLA2Q9P2R7 463 aaPredicted RBP26.83■■□□□ 1.89
PTPN18-213ENST00000489215 PCDHB7Q9Y5E2 793 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 STK24Q9Y6E0 443 aa26.83■■□□□ 1.89
PTPN18-213ENST00000489215 CDH23Q9H251 3354 aa26.83■■□□□ 1.88
PTPN18-213ENST00000489215 TMEM150BA6NC51 233 aa26.82■■□□□ 1.88
PTPN18-213ENST00000489215 WNT7AO00755 349 aa26.82■■□□□ 1.88
PTPN18-213ENST00000489215 ASAP2O43150 1006 aa26.82■■□□□ 1.88
PTPN18-213ENST00000489215 CD2BP2O95400 341 aaKnown RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms