RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 PTH1RQ03431 593 aa18.48■□□□□ 0.55
USP48-210ENST00000489108 DSC3Q14574 896 aa18.48■□□□□ 0.55
USP48-210ENST00000489108 MCTP2Q6DN12 878 aa18.48■□□□□ 0.55
USP48-210ENST00000489108 KANK3Q6NY19 840 aa18.48■□□□□ 0.55
USP48-210ENST00000489108 FAM228AQ86W67 206 aa18.48■□□□□ 0.55
USP48-210ENST00000489108 C12orf76Q8N812 135 aaPredicted RBP18.48■□□□□ 0.55
USP48-210ENST00000489108 ZNF558Q96NG5 402 aa18.48■□□□□ 0.55
USP48-210ENST00000489108 RNF19AQ9NV58 838 aa18.48■□□□□ 0.55
USP48-210ENST00000489108 SPG21Q9NZD8 308 aa18.48■□□□□ 0.55
USP48-210ENST00000489108 NFASCO94856 1347 aa18.48■□□□□ 0.55
USP48-210ENST00000489108 hCG_1642624A0A1W2PR95 340 aa18.47■□□□□ 0.55
USP48-210ENST00000489108 C2orf71A6NGG8 1288 aa18.47■□□□□ 0.55
USP48-210ENST00000489108 HBP1O60381 514 aa18.47■□□□□ 0.55
USP48-210ENST00000489108 CLASP2O75122 1294 aaKnown RBP18.47■□□□□ 0.55
USP48-210ENST00000489108 MTHFRP42898 656 aa18.47■□□□□ 0.55
USP48-210ENST00000489108 CRYBB1P53674 252 aaPredicted RBP18.47■□□□□ 0.55
USP48-210ENST00000489108 ITGB3BPQ13352 177 aaPredicted RBP18.47■□□□□ 0.55
USP48-210ENST00000489108 SMC1AQ14683 1233 aaKnown RBP18.47■□□□□ 0.55
USP48-210ENST00000489108 KIZQ2M2Z5 673 aa18.47■□□□□ 0.55
USP48-210ENST00000489108 RARS2Q5T160 578 aaKnown RBP18.47■□□□□ 0.55
USP48-210ENST00000489108 ZDHHC14Q8IZN3 488 aa18.47■□□□□ 0.55
USP48-210ENST00000489108 OSMRQ99650 979 aa18.47■□□□□ 0.55
USP48-210ENST00000489108 LZTS2Q9BRK4 669 aa18.47■□□□□ 0.55
USP48-210ENST00000489108 IGKV6D-21A0A0A0MT36 114 aa18.46■□□□□ 0.55
USP48-210ENST00000489108 PI15O43692 258 aa18.46■□□□□ 0.55
USP48-210ENST00000489108 DDAH1O94760 285 aa18.46■□□□□ 0.55
USP48-210ENST00000489108 PPM1AP35813 382 aa18.46■□□□□ 0.55
USP48-210ENST00000489108 SLC26A2P50443 739 aa18.46■□□□□ 0.55
USP48-210ENST00000489108 FLCNQ8NFG4 579 aa18.46■□□□□ 0.55
USP48-210ENST00000489108 RWDD1Q9H446 243 aaPredicted RBP18.46■□□□□ 0.55
USP48-210ENST00000489108 LY9Q9HBG7 655 aa18.46■□□□□ 0.55
USP48-210ENST00000489108 GVINP1Q7Z2Y8 2422 aa18.45■□□□□ 0.54
USP48-210ENST00000489108 BACH1O14867 736 aa18.45■□□□□ 0.54
USP48-210ENST00000489108 GPR32O75388 356 aa18.45■□□□□ 0.54
USP48-210ENST00000489108 CXCL14O95715 111 aa18.45■□□□□ 0.54
USP48-210ENST00000489108 GNAQP50148 359 aa18.45■□□□□ 0.54
USP48-210ENST00000489108 ZNF484Q5JVG2 852 aa18.45■□□□□ 0.54
USP48-210ENST00000489108 CWF19L1Q69YN2 538 aaKnown RBP18.45■□□□□ 0.54
USP48-210ENST00000489108 MB21D2Q8IYB1 491 aaPredicted RBP18.45■□□□□ 0.54
USP48-210ENST00000489108 TDRD5Q8NAT2 981 aaKnown RBP18.45■□□□□ 0.54
USP48-210ENST00000489108 AGO4Q9HCK5 861 aaKnown RBP18.45■□□□□ 0.54
USP48-210ENST00000489108 ZBTB42B2RXF5 422 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 DDX39AO00148 427 aaKnown RBP18.44■□□□□ 0.54
USP48-210ENST00000489108 HOXA2O43364 376 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 CCNE2O96020 404 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 IGHDP01880 384 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 VTNP04004 478 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 RXRAP19793 462 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 CA8P35219 290 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 ATAT1Q5SQI0 421 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 ABHD15Q6UXT9 468 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 ABI1Q8IZP0 508 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 SLC39A11Q8N1S5 342 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 LRRC43Q8N309 656 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 PLCD3Q8N3E9 789 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 CCDC82Q8N4S0 544 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 PGBD1Q96JS3 809 aa18.44■□□□□ 0.54
USP48-210ENST00000489108 DBR1Q9UK59 544 aaKnown RBP18.44■□□□□ 0.54
USP48-210ENST00000489108 COL1A2P08123 1366 aa18.43■□□□□ 0.54
USP48-210ENST00000489108 WDR87Q6ZQQ6 2873 aa18.43■□□□□ 0.54
USP48-210ENST00000489108 NT5C1B-RDH14C9J2C7 533 aa18.43■□□□□ 0.54
USP48-210ENST00000489108 NPR3P17342 541 aa18.43■□□□□ 0.54
USP48-210ENST00000489108 ATP4AP20648 1035 aa18.43■□□□□ 0.54
USP48-210ENST00000489108 FAM160B1Q5W0V3 765 aa18.43■□□□□ 0.54
USP48-210ENST00000489108 KIAA1841Q6NSI8 718 aa18.43■□□□□ 0.54
USP48-210ENST00000489108 ECHDC2Q86YB7 292 aa18.43■□□□□ 0.54
USP48-210ENST00000489108 CCDC60Q8IWA6 550 aaPredicted RBP18.43■□□□□ 0.54
USP48-210ENST00000489108 FEZF2Q8TBJ5 459 aa18.43■□□□□ 0.54
USP48-210ENST00000489108 USTQ9Y2C2 406 aa18.43■□□□□ 0.54
USP48-210ENST00000489108 C22orf31O95567 290 aa18.42■□□□□ 0.54
USP48-210ENST00000489108 EOMESO95936 686 aa18.42■□□□□ 0.54
USP48-210ENST00000489108 AOC1P19801 751 aa18.42■□□□□ 0.54
USP48-210ENST00000489108 ANGPT1Q15389 498 aa18.42■□□□□ 0.54
USP48-210ENST00000489108 CEP55Q53EZ4 464 aa18.42■□□□□ 0.54
USP48-210ENST00000489108 CLLU1OSQ5K130 101 aa18.42■□□□□ 0.54
USP48-210ENST00000489108 SWSAP1Q6NVH7 229 aa18.42■□□□□ 0.54
USP48-210ENST00000489108 PDXDC2PQ6P474 469 aa18.42■□□□□ 0.54
USP48-210ENST00000489108 TRMT1LQ7Z2T5 733 aaKnown RBP18.42■□□□□ 0.54
USP48-210ENST00000489108 HEATR3Q7Z4Q2 680 aa18.42■□□□□ 0.54
USP48-210ENST00000489108 METTL13Q8N6R0 699 aa18.42■□□□□ 0.54
USP48-210ENST00000489108 RNF169Q8NCN4 708 aa18.42■□□□□ 0.54
USP48-210ENST00000489108 ZNF302Q9NR11 478 aa18.42■□□□□ 0.54
USP48-210ENST00000489108 CYP26B1Q9NR63 512 aa18.42■□□□□ 0.54
USP48-210ENST00000489108 CACNA1AO00555 2505 aa18.41■□□□□ 0.54
USP48-210ENST00000489108 MEIS1O00470 390 aa18.41■□□□□ 0.54
USP48-210ENST00000489108 EPCAMP16422 314 aa18.41■□□□□ 0.54
USP48-210ENST00000489108 ZSCAN20P17040 1043 aaPredicted RBP18.41■□□□□ 0.54
USP48-210ENST00000489108 METAP2P50579 478 aaKnown RBP eCLIP18.41■□□□□ 0.54
USP48-210ENST00000489108 NFXL1Q6ZNB6 911 aa18.41■□□□□ 0.54
USP48-210ENST00000489108 RAB11FIP4Q86YS3 637 aa18.41■□□□□ 0.54
USP48-210ENST00000489108 CCDC105Q8IYK2 499 aa18.41■□□□□ 0.54
USP48-210ENST00000489108 DTWD2Q8NBA8 298 aa18.41■□□□□ 0.54
USP48-210ENST00000489108 AUTS2Q8WXX7 1259 aa18.41■□□□□ 0.54
USP48-210ENST00000489108 EP300Q09472 2414 aaPredicted RBP18.4■□□□□ 0.54
USP48-210ENST00000489108 BCAR1P56945 870 aa18.4■□□□□ 0.54
USP48-210ENST00000489108 NLRP11P59045 1033 aaKnown RBP18.4■□□□□ 0.54
USP48-210ENST00000489108 BMS1Q14692 1282 aaKnown RBP18.4■□□□□ 0.54
USP48-210ENST00000489108 CASC1Q6TDU7 716 aa18.4■□□□□ 0.54
USP48-210ENST00000489108 TMC5Q6UXY8 1006 aa18.4■□□□□ 0.54
USP48-210ENST00000489108 CKAP2LQ8IYA6 745 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms