RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 SPRED2Q7Z698 418 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 CRIPAKQ8N1N5 446 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 PPP1R16BQ96T49 567 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 EIF2AK1Q9BQI3 630 aaKnown RBP17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 LXNQ9BS40 222 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 ZBED2Q9BTP6 218 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 SUGCTQ9HAC7 445 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 ERVK-5Q9HDB9 667 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 GINS2Q9Y248 185 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 NOC2LQ9Y3T9 749 aaKnown RBP17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 KIF3AQ9Y496 699 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 CHD7Q9P2D1 2997 aa17.89■□□□□ 0.45
CTDSP1-209ENST00000488627 MAFO75444 373 aaPredicted RBP17.88■□□□□ 0.45
CTDSP1-209ENST00000488627 TMOD1P28289 359 aa17.88■□□□□ 0.45
CTDSP1-209ENST00000488627 NPEPPSP55786 919 aa17.88■□□□□ 0.45
CTDSP1-209ENST00000488627 NLRP11P59045 1033 aaKnown RBP17.88■□□□□ 0.45
CTDSP1-209ENST00000488627 CTTNQ14247 550 aaKnown RBP17.88■□□□□ 0.45
CTDSP1-209ENST00000488627 NBR1Q14596 966 aa17.88■□□□□ 0.45
CTDSP1-209ENST00000488627 TMEM266Q2M3C6 531 aa17.88■□□□□ 0.45
CTDSP1-209ENST00000488627 TTC38Q5R3I4 469 aa17.88■□□□□ 0.45
CTDSP1-209ENST00000488627 PLA2G4FQ68DD2 849 aa17.88■□□□□ 0.45
CTDSP1-209ENST00000488627 ZSWIM4Q9H7M6 989 aa17.88■□□□□ 0.45
CTDSP1-209ENST00000488627 CYP26B1Q9NR63 512 aa17.88■□□□□ 0.45
CTDSP1-209ENST00000488627 EPOPA6NHQ4 379 aa17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 DKC1O60832 514 aaKnown RBP eCLIP17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 LYPLA2O95372 231 aa17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 CYP4A11Q02928 519 aa17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 FAM228AQ86W67 206 aa17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 ZNF710Q8N1W2 664 aa17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 SP7Q8TDD2 431 aaPredicted RBP17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 MAP7D2Q96T17 732 aa17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 OSMRQ99650 979 aa17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 FTHL17Q9BXU8 183 aa17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 TSPYL2Q9H2G4 693 aaPredicted RBP17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 SMC3Q9UQE7 1217 aa17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 AKT3Q9Y243 479 aa17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 INSL6Q9Y581 213 aa17.87■□□□□ 0.45
CTDSP1-209ENST00000488627 LINC01553A4QN01 128 aa17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 POTEMA6NI47 508 aa17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 RPS6KA5O75582 802 aa17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 UPP2O95045 317 aa17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 OR52Z1P0C646 297 aa17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 SPATA31C1P0DKV0 1188 aa17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 FOSL2P15408 326 aa17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 YWHABP31946 246 aaKnown RBP17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 GPC3P51654 580 aa17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 PAK2Q13177 524 aa17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 GNL2Q13823 731 aaKnown RBP17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 FAM43BQ6ZT52 329 aaPredicted RBP17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 TPH2Q8IWU9 490 aa17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 DHX33Q9H6R0 707 aaKnown RBP17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 CERS4Q9HA82 394 aa17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 ST3GAL5Q9UNP4 418 aa17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 PCDHB6Q9Y5E3 794 aa17.86■□□□□ 0.45
CTDSP1-209ENST00000488627 RFXAPO00287 272 aa17.85■□□□□ 0.45
CTDSP1-209ENST00000488627 MGEA5O60502 916 aa17.85■□□□□ 0.45
CTDSP1-209ENST00000488627 NFX1Q12986 1120 aaKnown RBP17.85■□□□□ 0.45
CTDSP1-209ENST00000488627 ZNF668Q96K58 619 aaPredicted RBP17.85■□□□□ 0.45
CTDSP1-209ENST00000488627 CEP170P1Q96L14 293 aa17.85■□□□□ 0.45
CTDSP1-209ENST00000488627 NOL7Q9UMY1 257 aaKnown RBP17.85■□□□□ 0.45
CTDSP1-209ENST00000488627 PPME1Q9Y570 386 aa17.85■□□□□ 0.45
CTDSP1-209ENST00000488627 GPR182O15218 404 aa17.84■□□□□ 0.45
CTDSP1-209ENST00000488627 DARSP14868 501 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-209ENST00000488627 EIF4BP23588 611 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-209ENST00000488627 TECP42680 631 aa17.84■□□□□ 0.45
CTDSP1-209ENST00000488627 ERVK-21P61565 698 aa17.84■□□□□ 0.45
CTDSP1-209ENST00000488627 DSC3Q14574 896 aa17.84■□□□□ 0.45
CTDSP1-209ENST00000488627 LARP1BQ659C4 914 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-209ENST00000488627 OTUD6AQ7L8S5 288 aa17.84■□□□□ 0.45
CTDSP1-209ENST00000488627 NEK9Q8TD19 979 aa17.84■□□□□ 0.45
CTDSP1-209ENST00000488627 RC3H2Q9HBD1 1191 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-209ENST00000488627 SUCLA2Q9P2R7 463 aaPredicted RBP17.84■□□□□ 0.45
CTDSP1-209ENST00000488627 MYH9P35579 1960 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 PTPRSQ13332 1948 aa17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 A0A087WWV3 80 aa17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 DNM2P50570 870 aa17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 CDC42EP1Q00587 391 aa17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 PTGDRQ13258 359 aa17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 MCTP1Q6DN14 999 aa17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 CATSPER3Q86XQ3 398 aa17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 MAFAQ8NHW3 353 aaPredicted RBP17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 ARNTL2Q8WYA1 636 aa17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 ZNF689Q96CS4 500 aaPredicted RBP17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 TGS1Q96RS0 853 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 YME1L1Q96TA2 773 aa17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 GAS2L1Q99501 681 aaPredicted RBP17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 ADAM2Q99965 735 aa17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 JPH2Q9BR39 696 aaPredicted RBP17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 RGS18Q9NS28 235 aa17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 ANKEF1Q9NU02 776 aa17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 SIP14410 1827 aa17.83■□□□□ 0.44
CTDSP1-209ENST00000488627 C9IYK1 514 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 H3BQV1 296 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 LPXNO60711 386 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 MED24O75448 989 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 DGKIO75912 1065 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 LINC00271P0C7V0 271 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 XRCC6P12956 609 aaKnown RBP eCLIP17.82■□□□□ 0.448e-6■□□□□ 10.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms