RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 FAM35AQ86V20 835 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 CACNA2D3Q8IZS8 1091 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 SH2D3CQ8N5H7 860 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 SREK1Q8WXA9 508 aaKnown RBP5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 TBC1D5Q92609 795 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 JAKMIP2Q96AA8 810 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 GDAP1L1Q96MZ0 367 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 TSC22D3Q99576 134 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 SLX1AQ9BQ83 275 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 GORASP1Q9BQQ3 440 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 NOC4LQ9BVI4 516 aaKnown RBP5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 YIPF3Q9GZM5 350 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 CAPN10Q9HC96 672 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 BABAM1Q9NWV8 329 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 TSPYL4Q9UJ04 414 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 ZNF609O15014 1411 aa5.23□□□□□ -1.57
CDC42BPA-213ENST00000488131 RIMS1Q86UR5 1692 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 GMNCA6NCL1 334 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 E7EVH7 732 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 SH2B2O14492 632 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 ENC1O14682 589 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 TEX33O43247 280 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 PAGE1O75459 146 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 NDUFA10O95299 355 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 SSBP05455 408 aaKnown RBP eCLIP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 H2AFB1P0C5Y9 115 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 H2AFB2P0C5Z0 115 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 EIF2AK2P19525 551 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 CNGA1P29973 690 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 PDIA3P30101 505 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 CASP14P31944 242 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 ADH7P40394 386 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 SEC24CP53992 1094 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 SEPT2Q15019 361 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 CCDC85BQ15834 202 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 HHATQ5VTY9 493 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 SPATA1Q5VX52 437 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 LRIG3Q6UXM1 1119 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 STOX1Q6ZVD7 989 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 ZNF654Q8IZM8 581 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 EIF1ADQ8N9N8 165 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 ASAP3Q8TDY4 903 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 PLD4Q96BZ4 506 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 HVCN1Q96D96 273 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 RBM41Q96IZ5 413 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 SEC16BQ96JE7 1060 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 SPACA7Q96KW9 195 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 SEC62Q99442 399 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 LPIN3Q9BQK8 851 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 TSGA10Q9BZW7 698 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 ZNF576Q9H609 170 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 CCSER2Q9H7U1 834 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 SEC31BQ9NQW1 1179 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 SAMSN1Q9NSI8 373 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 HDAC6Q9UBN7 1215 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 LEMD3Q9Y2U8 911 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 ALKQ9UM73 1620 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 KDM3BQ7LBC6 1761 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 CASZ1Q86V15 1759 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 LRRC10BA6NIK2 292 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 KIF28PB7ZC32 967 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 GNAT1P11488 350 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 XRCC5P13010 732 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 CCND1P24385 295 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 ABCD1P33897 745 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 CTCFP49711 727 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 HERVK_113P62684 666 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 MRPS35P82673 323 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 CUL3Q13618 768 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 CUL4BQ13620 913 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 EIF4A2Q14240 407 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 ITIH4Q14624 930 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 RRS1Q15050 365 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 POSTNQ15063 836 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 IFI16Q16666 785 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 LONRF3Q496Y0 759 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 CFAP58Q5T655 872 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 HAUS3Q68CZ6 603 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 VN1R5Q7Z5H4 357 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 CREG2Q8IUH2 290 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 SMCR8Q8TEV9 937 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 AGAP11Q8TF27 550 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 NUP133Q8WUM0 1156 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 TBC1D31Q96DN5 1066 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 C8orf76Q96K31 380 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 MAP3K14Q99558 947 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 DNAJC7Q99615 494 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 FSD1Q9BTV5 496 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 RSRP1Q9BUV0 290 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 SMG9Q9H0W8 520 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 TAF1DQ9H5J8 278 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 GDF3Q9NR23 364 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 CTNNAL1Q9UBT7 734 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 ADAMTS1Q9UHI8 967 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 PPM1HQ9ULR3 514 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 TRIM33Q9UPN9 1127 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 TLR6Q9Y2C9 796 aa5.22□□□□□ -1.57
CDC42BPA-213ENST00000488131 STARD13Q9Y3M8 1113 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms