RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 POTECB2RU33 542 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 ALDH5A1P51649 535 aaPredicted RBP15.4■□□□□ 0.06
COL16A1-214ENST00000488128 POTEBQ6S5H4 581 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 GLYCTKQ8IVS8 523 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 DYDC1Q8WWB3 177 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 ATXN2LQ8WWM7 1075 aaKnown RBP15.4■□□□□ 0.06
COL16A1-214ENST00000488128 SYN2Q92777 582 aaPredicted RBP15.4■□□□□ 0.06
COL16A1-214ENST00000488128 STK17AQ9UEE5 414 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 PTPN22Q9Y2R2 807 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 NRAPQ86VF7 1730 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 IGF2BP3O00425 579 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL16A1-214ENST00000488128 MEIS1O00470 390 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 H2AFZP0C0S5 128 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 STAT3P40763 770 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 DR1Q01658 176 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 DCAF12L1Q5VU92 463 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 DENND2CQ68D51 928 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 H2AFVQ71UI9 128 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 NT5DC3Q86UY8 548 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 TLCD1Q96CP7 247 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 C18orf8Q96DM3 657 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 FGFR1OP2Q9NVK5 253 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 DNAJC17Q9NVM6 304 aaKnown RBP15.4■□□□□ 0.06
COL16A1-214ENST00000488128 RREB1Q92766 1687 aa15.4■□□□□ 0.06
COL16A1-214ENST00000488128 SRRM3A6NNA2 597 aaPredicted RBP15.39■□□□□ 0.05
COL16A1-214ENST00000488128 TMEM110-MUSTN1A8MSY1 372 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 CLIC2O15247 247 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 RFC4P35249 363 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 PMS2P54278 862 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 GALCP54803 685 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 EXOC3L4Q17RC7 722 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 GALNT17Q6IS24 598 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 BZW1Q7L1Q6 419 aaKnown RBP15.39■□□□□ 0.05
COL16A1-214ENST00000488128 GPBP1Q86WP2 473 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 ERICH1Q86X53 443 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 ANKRD42Q8N9B4 389 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 LMBR1Q8WVP7 490 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 ZNF622Q969S3 477 aaKnown RBP eCLIP15.39■□□□□ 0.05
COL16A1-214ENST00000488128 ZNF570Q96NI8 536 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 C15orf41Q9Y2V0 281 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 IGSF9BQ9UPX0 1349 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 DDX3XO00571 662 aaKnown RBP eCLIP15.39■□□□□ 0.05
COL16A1-214ENST00000488128 ZBTB48P10074 688 aaPredicted RBP15.39■□□□□ 0.05
COL16A1-214ENST00000488128 CASP4P49662 377 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 SEMA3FQ13275 785 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 COBLL1Q53SF7 1204 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 SLC17A8Q8NDX2 589 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 GDAP1Q8TB36 358 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 ARHGEF10LQ9HCE6 1279 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 GPCPD1Q9NPB8 672 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 SLC12A4Q9UP95 1085 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 DAAM1Q9Y4D1 1078 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 CASZ1Q86V15 1759 aa15.39■□□□□ 0.05
COL16A1-214ENST00000488128 RAD21O60216 631 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 KRT16P08779 473 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 PLCG2P16885 1265 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 PON1P27169 355 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 SBK1Q52WX2 424 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 TRIM68Q6AZZ1 485 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 ARMC9Q7Z3E5 817 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 FMNL3Q8IVF7 1028 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 C3orf20Q8ND61 904 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 NEK9Q8TD19 979 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 ECT2Q9H8V3 914 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.38■□□□□ 0.05
COL16A1-214ENST00000488128 BMP2KQ9NSY1 1161 aaPredicted RBP15.38■□□□□ 0.05
COL16A1-214ENST00000488128 PCDHB13Q9Y5F0 798 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 ABCB11O95342 1321 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 CCDC188H7C350 402 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 KCNA1Q09470 495 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 PROM2Q8N271 834 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 SLC35G2Q8TBE7 412 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 CALR3Q96L12 384 aaKnown RBP15.38■□□□□ 0.05
COL16A1-214ENST00000488128 PPP1R12AO14974 1030 aaPredicted RBP15.38■□□□□ 0.05
COL16A1-214ENST00000488128 CETN3O15182 167 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 FLOT1O75955 427 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 RASA1P20936 1047 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 LRRC47Q8N1G4 583 aaKnown RBP15.38■□□□□ 0.05
COL16A1-214ENST00000488128 MAGEC3Q8TD91 643 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 KLHL29Q96CT2 875 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 YIPF3Q9GZM5 350 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 CNOT10Q9H9A5 744 aaKnown RBP15.38■□□□□ 0.05
COL16A1-214ENST00000488128 FAM114A2Q9NRY5 505 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 ARMCX3Q9UH62 379 aaPredicted RBP15.38■□□□□ 0.05
COL16A1-214ENST00000488128 AMFRQ9UKV5 643 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 TRPC6Q9Y210 931 aa15.38■□□□□ 0.05
COL16A1-214ENST00000488128 LAMB2P55268 1798 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 SFI1A8K8P3 1242 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 TCP11X1B4DZS4 312 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 PPFIA2O75334 1257 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 GHRP10912 638 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 LONRF1Q17RB8 773 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 SEPT14Q6ZU15 432 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 PIGWQ7Z7B1 504 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 HOOK3Q86VS8 718 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.37■□□□□ 0.05
COL16A1-214ENST00000488128 CEP95Q96GE4 821 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 EYA3Q99504 573 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 KCNG1Q9UIX4 513 aa15.37■□□□□ 0.05
COL16A1-214ENST00000488128 PCDHA12Q9UN75 941 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms