RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 KIZQ2M2Z5 673 aa19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 TMEM240Q5SV17 173 aa19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 CABP7Q86V35 215 aa19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 TMEM199Q8N511 208 aa19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 NEK9Q8TD19 979 aa19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 GPRC5CQ9NQ84 441 aa19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 CEP131Q9UPN4 1083 aa19.15■□□□□ 0.66
SHROOM1-205ENST00000488072 A0A087X0B3 334 aa19.14■□□□□ 0.65
SHROOM1-205ENST00000488072 USO1O60763 962 aaKnown RBP19.14■□□□□ 0.65
SHROOM1-205ENST00000488072 GHRP10912 638 aa19.14■□□□□ 0.65
SHROOM1-205ENST00000488072 KRT79Q5XKE5 535 aa19.14■□□□□ 0.65
SHROOM1-205ENST00000488072 TAF2Q6P1X5 1199 aa19.14■□□□□ 0.65
SHROOM1-205ENST00000488072 OTOP2Q7RTS6 562 aa19.14■□□□□ 0.65
SHROOM1-205ENST00000488072 TMEM40Q8WWA1 233 aa19.14■□□□□ 0.65
SHROOM1-205ENST00000488072 SYMPKQ92797 1274 aaKnown RBP19.14■□□□□ 0.65
SHROOM1-205ENST00000488072 AGO3Q9H9G7 860 aaKnown RBP19.14■□□□□ 0.65
SHROOM1-205ENST00000488072 IL23AQ9NPF7 189 aa19.14■□□□□ 0.65
SHROOM1-205ENST00000488072 ANKEF1Q9NU02 776 aa19.14■□□□□ 0.65
SHROOM1-205ENST00000488072 CXXC1Q9P0U4 656 aaPredicted RBP19.14■□□□□ 0.65
SHROOM1-205ENST00000488072 AKT3Q9Y243 479 aa19.14■□□□□ 0.65
SHROOM1-205ENST00000488072 GPR32O75388 356 aa19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 BMP15O95972 392 aa19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 NCLP19338 710 aaKnown RBP19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 FGFR4P22455 802 aa19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 LPIN1Q14693 890 aa19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 EMC2Q15006 297 aa19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 TMEM119Q4V9L6 283 aa19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 FAM26DQ5JW98 314 aa19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 AXDND1Q5T1B0 1012 aaPredicted RBP19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 CCDC155Q8N6L0 562 aa19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 NACC1Q96RE7 527 aa19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 OSMRQ99650 979 aa19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 BHMT2Q9H2M3 363 aa19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 DHX33Q9H6R0 707 aaKnown RBP19.13■□□□□ 0.65
SHROOM1-205ENST00000488072 TET1Q8NFU7 2136 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 MAGEB2O15479 319 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 DKC1O60832 514 aaKnown RBP eCLIP19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 LONP1P36776 959 aaKnown RBP19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 POLGP54098 1239 aaPredicted RBP19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 NLRP11P59045 1033 aaKnown RBP19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 PPIGQ13427 754 aaKnown RBP eCLIP19.12■□□□□ 0.652e-6■■■□□ 15.1
SHROOM1-205ENST00000488072 HAUS3Q68CZ6 603 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 OTUD6AQ7L8S5 288 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 TMCO2Q7Z6W1 182 aaPredicted RBP19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 RPAINQ86UA6 219 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 KRI1Q8N9T8 703 aaKnown RBP19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 DBF4BQ8NFT6 615 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 ASAP3Q8TDY4 903 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 TNPO1Q92973 898 aaKnown RBP19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 RUSC1Q9BVN2 902 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 CELF4Q9BZC1 486 aaKnown RBP19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 RAB34Q9BZG1 259 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 ADAMTS10Q9H324 1103 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 SUCLA2Q9P2R7 463 aaPredicted RBP19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 RCOR1Q9UKL0 485 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 PCDHA7Q9UN72 937 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 TRPV2Q9Y5S1 764 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 KAT6AQ92794 2004 aa19.12■□□□□ 0.65
SHROOM1-205ENST00000488072 NPHP3-ACAD11A0A0J9YXS1 232 aa19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 YEATS4O95619 227 aa19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 CXCL10P02778 98 aa19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 PLCG1P19174 1290 aa19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 CD52P31358 61 aa19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 DHX8Q14562 1220 aaKnown RBP19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 FBXO47Q5MNV8 452 aa19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 HYIQ5T013 277 aa19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 FAM109BQ6ICB4 259 aaPredicted RBP19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 SHC4Q6S5L8 630 aa19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 PADI6Q6TGC4 694 aa19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 LEO1Q8WVC0 666 aaPredicted RBP19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 BLOC1S4Q9NUP1 217 aa19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 DBR1Q9UK59 544 aaKnown RBP19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 NOC2LQ9Y3T9 749 aaKnown RBP19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 MYH15Q9Y2K3 1946 aa19.11■□□□□ 0.65
SHROOM1-205ENST00000488072 EVPLQ92817 2033 aa19.1■□□□□ 0.65
SHROOM1-205ENST00000488072 SSBP05455 408 aaKnown RBP eCLIP19.1■□□□□ 0.65
SHROOM1-205ENST00000488072 PDIA4P13667 645 aaKnown RBP19.1■□□□□ 0.65
SHROOM1-205ENST00000488072 UBA7P41226 1012 aa19.1■□□□□ 0.65
SHROOM1-205ENST00000488072 GPC3P51654 580 aa19.1■□□□□ 0.65
SHROOM1-205ENST00000488072 CACNB1Q02641 598 aaPredicted RBP19.1■□□□□ 0.65
SHROOM1-205ENST00000488072 RAD51AP2Q09MP3 1159 aa19.1■□□□□ 0.65
SHROOM1-205ENST00000488072 RHPN2Q8IUC4 686 aa19.1■□□□□ 0.65
SHROOM1-205ENST00000488072 PRPF31Q8WWY3 499 aaKnown RBP19.1■□□□□ 0.65
SHROOM1-205ENST00000488072 BSNDQ8WZ55 320 aa19.1■□□□□ 0.65
SHROOM1-205ENST00000488072 SIP14410 1827 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 A0A087WZ62 844 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 ARHGEF35A5YM69 484 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 GRXCR1A8MXD5 290 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 PPP6R2O75170 966 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 EYA4O95677 639 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 FGBP02675 491 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 BMP8BP34820 402 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 NUCB2P80303 420 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 MCM6Q14566 821 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 RSPH3Q86UC2 560 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 AK8Q96MA6 479 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 NLRP4Q96MN2 994 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 MTRQ99707 1265 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 FDXACB1Q9BRP7 624 aaPredicted RBP19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 POLR3FQ9H1D9 316 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms