RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 TAF7LQ5H9L4 462 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 VASNQ6EMK4 673 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 DPY19L2P1Q6NXN4 242 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 TMC5Q6UXY8 1006 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 ARHGAP36Q6ZRI8 547 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 DDX53Q86TM3 631 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 TRIM48Q8IWZ4 208 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 RPUSD2Q8IZ73 545 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 PPM1KQ8N3J5 372 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 NEIL1Q96FI4 390 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 WNK4Q96J92 1243 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 CAAP1Q9H8G2 361 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 H2AFY2Q9P0M6 372 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 B4E1Z4 1266 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 DVL2O14641 736 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 RAD17O75943 681 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 EYA4O95677 639 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 ZBTB48P10074 688 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 MAKP20794 623 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 CNGA1P29973 690 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 ATXN1P54253 815 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 EVA1CP58658 441 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 RAC3P60763 192 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 LACTBP83111 547 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 DGCR2P98153 550 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 DSG1Q02413 1049 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 STRN3Q13033 797 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 GPR19Q15760 415 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 CRY1Q16526 586 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 FAM47CQ5HY64 1035 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 UBE2R2Q712K3 238 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 POLNQ7Z5Q5 900 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 MRGPRGQ86SM5 289 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 NOSTRINQ8IVI9 506 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 CHST14Q8NCH0 376 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 UHMK1Q8TAS1 419 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 CLEC4DQ8WXI8 215 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 NAF1Q96HR8 494 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 PLEKHG4BQ96PX9 1271 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 ORAI3Q9BRQ5 295 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 SMOC1Q9H4F8 434 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 SLC6A20Q9NP91 592 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 MYOTQ9UBF9 498 aa4.07□□□□□ -1.76
R3HDM1-219ENST00000488035 PTPDC1A2A3K4 754 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 PLSCR1O15162 318 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 KRT37O76014 449 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 F2P00734 622 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 KNG1P01042 644 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 ATP2A2P16615 1042 aaKnown RBP4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 LMO1P25800 156 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 CSF2RBP32927 897 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 SOX5P35711 763 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 FLT3P36888 993 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 GRIN1Q05586 938 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 SPIRE1Q08AE8 756 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 TUBA3CQ13748 450 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 USP10Q14694 798 aaKnown RBP4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 CYP4F22Q6NT55 531 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 TUBA3EQ6PEY2 450 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 OTOP1Q7RTM1 612 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 LDLRAD3Q86YD5 345 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 FUKQ8N0W3 1084 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 DTX3Q8N9I9 347 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 CACTINQ8WUQ7 758 aaKnown RBP4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 CHTF18Q8WVB6 975 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 VOPP1Q96AW1 172 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 AURKAIP1Q9NWT8 199 aaPredicted RBP4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 ASH2LQ9UBL3 628 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 B4GALT6Q9UBX8 382 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 DSEQ9UL01 958 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 SRPK3Q9UPE1 567 aa4.06□□□□□ -1.76
R3HDM1-219ENST00000488035 FAM90A27PA6NNH2 459 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 ACOT7O00154 380 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 KRIT1O00522 736 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 SCDO00767 359 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 NEMP1O14524 444 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 NPTXRO95502 500 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 BPIP17213 487 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 ACRV1P26436 265 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 ADCYAP1R1P41586 468 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 TUSC3Q13454 348 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 CT47A1Q5JQC4 288 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 KCTD1Q719H9 257 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 DDX46Q7L014 1031 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 DDX42Q86XP3 938 aaKnown RBP eCLIP4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 AHI1Q8N157 1196 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 C2orf69Q8N8R5 385 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 SMC1BQ8NDV3 1235 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 TTLL11Q8NHH1 800 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 ZNF483Q8TF39 744 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 GPR101Q96P66 508 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 PRRX2Q99811 253 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 KATNBL1Q9H079 304 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 MS4A5Q9H3V2 200 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 SPTLC3Q9NUV7 552 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 THG1LQ9NWX6 298 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 WASF3Q9UPY6 502 aa4.05□□□□□ -1.76
R3HDM1-219ENST00000488035 ATP8A1Q9Y2Q0 1164 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms