RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 KCNT2Q6UVM3 1135 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 LBX2Q6XYB7 198 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 BRAPQ7Z569 592 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 SLC52A2Q9HAB3 445 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 DMRT1Q9Y5R6 373 aa5.29□□□□□ -1.56
HMGB1P36-201ENST00000487709 ARHGAP6O43182 974 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 KCNQ2O43526 872 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 NPTXRO95502 500 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 CRTAMO95727 393 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 HMGCRP04035 888 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 C6orf222P0C671 652 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 PDE6AP16499 860 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 CNGA1P29973 690 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 RPS19P39019 145 aaKnown RBP5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 SART3Q15020 963 aaKnown RBP5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 TKFCQ3LXA3 575 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 DPP8Q6V1X1 898 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 FILIP1Q7Z7B0 1213 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 GSTCDQ8NEC7 633 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 CHAC2Q8WUX2 184 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 SCYL1Q96KG9 808 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 PLA2G3Q9NZ20 509 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 ARHGAP28Q9P2N2 729 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 TRAF6Q9Y4K3 522 aa5.28□□□□□ -1.56
HMGB1P36-201ENST00000487709 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 SOD2P04179 222 aa5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 HMGB1P09429 215 aaKnown RBP5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 MYCLP1P12525 358 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 NEK4P51957 841 aa5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 EPHA5P54756 1037 aa5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 DBPQ10586 325 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 NTRK3Q16288 839 aa5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 DALRD3Q5D0E6 543 aaKnown RBP5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 HABP4Q5JVS0 413 aaKnown RBP5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 DPY19L2P1Q6NXN4 242 aa5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 LARP4Q71RC2 724 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 SGMS1Q86VZ5 419 aa5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 DHX37Q8IY37 1157 aaKnown RBP5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 CFHR4Q92496 578 aa5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 PDGFDQ9GZP0 370 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 CABP5Q9NP86 173 aa5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 SLC2A4RGQ9NR83 387 aa5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 SBNO2Q9Y2G9 1366 aa5.27□□□□□ -1.57
HMGB1P36-201ENST00000487709 RAMP2O60895 175 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 HHEXQ03014 270 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 NFYCQ13952 458 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 TM4SF20Q53R12 229 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 CNNM4Q6P4Q7 775 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 LRRTM3Q86VH5 581 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 SLC7A14Q8TBB6 771 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 FBXW5Q969U6 566 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 TMEM176AQ96HP8 235 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 TTPALQ9BTX7 342 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 ZDHHC5Q9C0B5 715 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 CAAP1Q9H8G2 361 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 CEP72Q9P209 647 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 CDC42EP3Q9UKI2 254 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 MAPRE3Q9UPY8 281 aa5.26□□□□□ -1.57
HMGB1P36-201ENST00000487709 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 CAPN14A8MX76 684 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 PDE8AO60658 829 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 IL13RA1P78552 427 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 CRHR2Q13324 411 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 GRM7Q14831 915 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 CRY1Q16526 586 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 C21orf62-AS1Q17RA5 79 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 CFAP100Q494V2 611 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 BTBD8Q5XKL5 378 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 PCSK4Q6UW60 755 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 USP30Q70CQ3 517 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 D2HGDHQ8N465 521 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 OR14K1Q8NGZ2 314 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 IPPKQ9H8X2 491 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 TRIM39Q9HCM9 518 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 CATSPERZQ9NTU4 200 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 RIC8BQ9NVN3 520 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 AURKAIP1Q9NWT8 199 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 GIT1Q9Y2X7 761 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 PCDHA9Q9Y5H5 950 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 PCDHA8Q9Y5H6 950 aa5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 TNPO3Q9Y5L0 923 aaKnown RBP5.25□□□□□ -1.57
HMGB1P36-201ENST00000487709 hCG_2014768A0A024R1R8 64 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 TCRBV16S1A1N1A0A5B0 115 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 ARVCFO00192 962 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 RASGRP1O95267 797 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 JMJD7P0C870 316 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 SRGAP2CP0DJJ0 459 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 PTPN1P18031 435 aaKnown RBP5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 LMO1P25800 156 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 ANAPC15P60006 121 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 FSTL1Q12841 308 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 HNRNPA0Q13151 305 aaKnown RBP5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 ZCCHC8Q6NZY4 707 aaKnown RBP5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 OTOP2Q7RTS6 562 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 GPR135Q8IZ08 494 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 SH3RF2Q8TEC5 729 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 WNK4Q96J92 1243 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 ZNF703Q9H7S9 590 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 PARPBPQ9NWS1 579 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms