RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 RNF41Q9H4P4 317 aaPredicted RBP7.58□□□□□ -1.2
SEC22C-215ENST00000487701 TCP11L1Q9NUJ3 509 aa7.58□□□□□ -1.2
SEC22C-215ENST00000487701 SRRDQ9UH36 339 aa7.58□□□□□ -1.2
SEC22C-215ENST00000487701 CTNNA3Q9UI47 895 aa7.58□□□□□ -1.2
SEC22C-215ENST00000487701 SYNPO2Q9UMS6 1093 aa7.58□□□□□ -1.2
SEC22C-215ENST00000487701 GABRQQ9UN88 632 aa7.58□□□□□ -1.2
SEC22C-215ENST00000487701 ADAMTS5Q9UNA0 930 aa7.58□□□□□ -1.2
SEC22C-215ENST00000487701 STX8Q9UNK0 236 aa7.58□□□□□ -1.2
SEC22C-215ENST00000487701 RABGAP1Q9Y3P9 1069 aa7.58□□□□□ -1.2
SEC22C-215ENST00000487701 RBM8AQ9Y5S9 174 aaKnown RBP7.58□□□□□ -1.2
SEC22C-215ENST00000487701 TNRC18O15417 2968 aaPredicted RBP7.57□□□□□ -1.2
SEC22C-215ENST00000487701 ALPK3Q96L96 1907 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 WDR64B1ANS9 1081 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 TNPO2O14787 897 aaKnown RBP7.57□□□□□ -1.2
SEC22C-215ENST00000487701 CDC45O75419 566 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 GSTP1P09211 210 aaKnown RBP7.57□□□□□ -1.2
SEC22C-215ENST00000487701 LIG1P18858 919 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 GSTT1P30711 240 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 SLFN13Q68D06 897 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 SND1Q7KZF4 910 aaKnown RBP eCLIP7.57□□□□□ -1.2
SEC22C-215ENST00000487701 CYB5R4Q7L1T6 521 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 SULF2Q8IWU5 870 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 REPS2Q8NFH8 660 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 ESR2Q92731 530 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 KCNB2Q92953 911 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 TMEM47Q9BQJ4 181 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 CCDC86Q9H6F5 360 aaKnown RBP7.57□□□□□ -1.2
SEC22C-215ENST00000487701 PPP1R9AQ9ULJ8 1098 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 LRRC37A2A6NM11 1700 aa7.57□□□□□ -1.2
SEC22C-215ENST00000487701 CCDC85CA6NKD9 419 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 VWA5AO00534 786 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 COBLO75128 1261 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 TOP1P11387 765 aaKnown RBP7.56□□□□□ -1.2
SEC22C-215ENST00000487701 MCCP23508 829 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 GRIK1P39086 918 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 ASPAP45381 313 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 FLT3LGP49771 235 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 TMEM132BQ14DG7 1078 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 ARHGEF6Q15052 776 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 GPR142Q7Z601 462 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 ENAHQ8N8S7 591 aaPredicted RBP7.56□□□□□ -1.2
SEC22C-215ENST00000487701 SH3TC2Q8TF17 1288 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 ARMC5Q96C12 935 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 SLF1Q9BQI6 1058 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 MOV10L1Q9BXT6 1211 aaKnown RBP7.56□□□□□ -1.2
SEC22C-215ENST00000487701 SPATC1LQ9H0A9 340 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 FAM105AQ9NUU6 356 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 HOXC10Q9NYD6 342 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 ZSWIM5Q9P217 1185 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 GJD2Q9UKL4 321 aa7.56□□□□□ -1.2
SEC22C-215ENST00000487701 TNKSO95271 1327 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 E7EWF7 191 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 SLC27A2O14975 620 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 FBXO24O75426 580 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 NFICP08651 508 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 PDHBP11177 359 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 HOXD10P28358 340 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 MAPK4P31152 587 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 SLC1A4P43007 532 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 CD97P48960 835 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 NT5C2P49902 561 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 PRMT2P55345 433 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 ANTXR2P58335 489 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 NECTIN1Q15223 517 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 SEC23AQ15436 765 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 SLC9C1Q4G0N8 1177 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 TTBK2Q6IQ55 1244 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 KCTD1Q719H9 257 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 PLEKHH3Q7Z736 793 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 MB21D2Q8IYB1 491 aaPredicted RBP7.55□□□□□ -1.2
SEC22C-215ENST00000487701 MB21D1Q8N884 522 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 RAET1EQ8TD07 263 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 ANKS1AQ92625 1134 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 USP6NLQ92738 828 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 COA7Q96BR5 231 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 ZNF333Q96JL9 665 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 TBC1D32Q96NH3 1257 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 KRT23Q9C075 422 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 CNNM2Q9H8M5 875 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 CBX8Q9HC52 389 aa7.55□□□□□ -1.2
SEC22C-215ENST00000487701 ZNF214Q9UL59 606 aaPredicted RBP7.55□□□□□ -1.2
SEC22C-215ENST00000487701 FRMPD2Q68DX3 1309 aaPredicted RBP7.54□□□□□ -1.2
SEC22C-215ENST00000487701 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.54□□□□□ -1.2
SEC22C-215ENST00000487701 TMEM232C9JQI7 657 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 PLA2G6O60733 806 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 SLFN14P0C7P3 912 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 SNHG28P0DPA3 235 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 TAL1P17542 331 aaPredicted RBP7.54□□□□□ -1.2
SEC22C-215ENST00000487701 ERCC3P19447 782 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 GRK4P32298 578 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 CCNA1P78396 465 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 ZNF543Q08ER8 600 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 MAP7Q14244 749 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 GRB14Q14449 540 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 CCDC96Q2M329 555 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 CREB3L3Q68CJ9 461 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 CASC1Q6TDU7 716 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 CHST3Q7LGC8 479 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 IQCA1Q86XH1 822 aa7.54□□□□□ -1.2
SEC22C-215ENST00000487701 DGKHQ86XP1 1220 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms