RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 ANKRD36CQ5JPF3 1778 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 RTP2Q5QGT7 225 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 USP53Q70EK8 1073 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 KSR1Q8IVT5 923 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 SP8Q8IXZ3 490 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 SLX4Q8IY92 1834 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 SMC1BQ8NDV3 1235 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 COPS5Q92905 334 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 GCC1Q96CN9 775 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 CDADC1Q9BWV3 514 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 RAPGEFL1Q9UHV5 662 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 VAV3Q9UKW4 847 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 ATP6V0A2Q9Y487 856 aa7.65□□□□□ -1.18
RTFDC1-209ENST00000487211 UNC79Q9P2D8 2635 aa7.65□□□□□ -1.19
RTFDC1-209ENST00000487211 COL4A1P02462 1669 aa7.64□□□□□ -1.19
RTFDC1-209ENST00000487211 WTIPA6NIX2 430 aaPredicted RBP7.64□□□□□ -1.19
RTFDC1-209ENST00000487211 ESR1P03372 595 aa7.64□□□□□ -1.19
RTFDC1-209ENST00000487211 BNIP3Q12983 259 aa7.64□□□□□ -1.19
RTFDC1-209ENST00000487211 SLC35F1Q5T1Q4 408 aa7.64□□□□□ -1.19
RTFDC1-209ENST00000487211 C1orf159Q96HA4 380 aa7.64□□□□□ -1.19
RTFDC1-209ENST00000487211 MRPL4Q9BYD3 311 aaKnown RBP7.64□□□□□ -1.19
RTFDC1-209ENST00000487211 AP5S1Q9NUS5 200 aa7.64□□□□□ -1.19
RTFDC1-209ENST00000487211 NDOR1Q9UHB4 597 aa7.64□□□□□ -1.19
RTFDC1-209ENST00000487211 PLAAQ9Y263 795 aa7.64□□□□□ -1.19
RTFDC1-209ENST00000487211 LTBP1Q14766 1721 aa7.64□□□□□ -1.19
RTFDC1-209ENST00000487211 ANKRD18BA2A2Z9 1011 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 C6orf222P0C671 652 aaPredicted RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 UBTFL1P0CB47 393 aaPredicted RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 RPL10P27635 214 aaKnown RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 RFX5P48382 616 aaPredicted RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 GABREP78334 506 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 GPSM2P81274 684 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 IFIT5Q13325 482 aaKnown RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 IKZF1Q13422 519 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 NTRK3Q16288 839 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 MSMPQ1L6U9 139 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 FNDC3BQ53EP0 1204 aaKnown RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 CCDC93Q567U6 631 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 EEF1DP3Q658K8 133 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 DENND5AQ6IQ26 1287 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 RCSD1Q6JBY9 416 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 ZPBP2Q6X784 338 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 FILIP1Q7Z7B0 1213 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 ANKRD18AQ8IVF6 992 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 ITPRIPQ8IWB1 547 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 PPIL6Q8IXY8 311 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 DHX37Q8IY37 1157 aaKnown RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 FTSJ3Q8IY81 847 aaKnown RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 NIM1KQ8IY84 436 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 RTKN2Q8IZC4 609 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 KREMEN2Q8NCW0 462 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 KLHDC4Q8TBB5 520 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 FRS2Q8WU20 508 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 NINJ1Q92982 152 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 CLUHP3Q96NS8 147 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 PUS3Q9BZE2 481 aaKnown RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 BSDC1Q9NW68 430 aaPredicted RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 CLEC1BQ9P126 229 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 SFMBT1Q9UHJ3 866 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 PRKAB1Q9Y478 270 aa7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 LRRFIP2Q9Y608 721 aaKnown RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 COL11A2P13942 1736 aaPredicted RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 DDX60Q8IY21 1712 aaKnown RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 RANBP2P49792 3224 aaKnown RBP7.63□□□□□ -1.19
RTFDC1-209ENST00000487211 SNED1Q8TER0 1413 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 TAF1P21675 1872 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 BRCA1P38398 1863 aaKnown RBP7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 RTL9Q8NET4 1388 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 SNAP23O00161 211 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 RFPL3O75679 317 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 GNAI3P08754 354 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 PLS3P13797 630 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 CD96P40200 585 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 TEKQ02763 1124 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 MVPQ14764 893 aaKnown RBP7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 CCDC57Q2TAC2 916 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 C16orf71Q8IYS4 520 aaPredicted RBP7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 NPLOC4Q8TAT6 608 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 PTPRN2Q92932 1015 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 MISP3Q96FF7 219 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 CDC5LQ99459 802 aaKnown RBP7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 PSMD1Q99460 953 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 RTFDC1Q9BY42 306 aaPredicted RBP7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 SPC25Q9HBM1 224 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 ZNF277Q9NRM2 450 aaPredicted RBP7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 POLLQ9UGP5 575 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 CEP290O15078 2479 aa7.62□□□□□ -1.19
RTFDC1-209ENST00000487211 MEFVO15553 781 aaPredicted RBP7.61□□□□□ -1.19
RTFDC1-209ENST00000487211 DNAJC6O75061 913 aa7.61□□□□□ -1.19
RTFDC1-209ENST00000487211 COBLO75128 1261 aa7.61□□□□□ -1.19
RTFDC1-209ENST00000487211 GNAI2P04899 355 aa7.61□□□□□ -1.19
RTFDC1-209ENST00000487211 ENDOUP21128 410 aaKnown RBP7.61□□□□□ -1.19
RTFDC1-209ENST00000487211 IGHMBP2P38935 993 aaKnown RBP7.61□□□□□ -1.19
RTFDC1-209ENST00000487211 RRP1P56182 461 aaKnown RBP7.61□□□□□ -1.19
RTFDC1-209ENST00000487211 LRRC24Q50LG9 513 aa7.61□□□□□ -1.19
RTFDC1-209ENST00000487211 DPP8Q6V1X1 898 aaPredicted RBP7.61□□□□□ -1.19
RTFDC1-209ENST00000487211 LDHAL6AQ6ZMR3 332 aa7.61□□□□□ -1.19
RTFDC1-209ENST00000487211 NAT16Q8N8M0 369 aa7.61□□□□□ -1.19
RTFDC1-209ENST00000487211 SLC7A14Q8TBB6 771 aa7.61□□□□□ -1.19
RTFDC1-209ENST00000487211 TBC1D16Q8TBP0 767 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms