RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 CYTH3O43739 400 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 EIF3JO75822 258 aaKnown RBP10.02□□□□□ -0.81
COL12A1-208ENST00000486533 POLR2MP0CAP2 368 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 CYP2C9P11712 490 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 MYCLP12524 364 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-208ENST00000486533 H2AFXP16104 143 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-208ENST00000486533 DNAJB2P25686 324 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 TBX2Q13207 712 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-208ENST00000486533 GPS2Q13227 327 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 SLC35G1Q2M3R5 365 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 SPATA1Q5VX52 437 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 CNGA4Q8IV77 575 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 CTCFLQ8NI51 663 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-208ENST00000486533 KCNK17Q96T54 332 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 WNT8AQ9H1J5 351 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 TTYH1Q9H313 450 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-208ENST00000486533 SEMA6BQ9H3T3 888 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 FAM217BQ9NTX9 383 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-208ENST00000486533 FANCLQ9NW38 375 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 NOD1Q9Y239 953 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 PPP2R2CQ9Y2T4 447 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 NFE2L3Q9Y4A8 694 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 CHD9Q3L8U1 2897 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 CUL9Q8IWT3 2517 aa10.02□□□□□ -0.81
COL12A1-208ENST00000486533 URI1O94763 535 aaPredicted RBP10.01□□□□□ -0.81
COL12A1-208ENST00000486533 MMP3P08254 477 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 SLFN14P0C7P3 912 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 ZNF18P17022 549 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 RXRAP19793 462 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 KIF5BP33176 963 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 SARSP49591 514 aaKnown RBP10.01□□□□□ -0.81
COL12A1-208ENST00000486533 GHRHRQ02643 423 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 ARHGAP1Q07960 439 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 KMT5BQ4FZB7 885 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 NFRKBQ6P4R8 1299 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 FBXO38Q6PIJ6 1188 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 OTOP2Q7RTS6 562 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 GPR161Q8N6U8 529 aaKnown RBP10.01□□□□□ -0.81
COL12A1-208ENST00000486533 PDILTQ8N807 584 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 SCLYQ96I15 445 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 AIFM3Q96NN9 605 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 CDX2Q99626 313 aaPredicted RBP10.01□□□□□ -0.81
COL12A1-208ENST00000486533 PDCD2LQ9BRP1 358 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 MTIF3Q9H2K0 278 aaKnown RBP10.01□□□□□ -0.81
COL12A1-208ENST00000486533 MAP3K20Q9NYL2 800 aaKnown RBP10.01□□□□□ -0.81
COL12A1-208ENST00000486533 SEC63Q9UGP8 760 aaKnown RBP10.01□□□□□ -0.81
COL12A1-208ENST00000486533 SERTAD1Q9UHV2 236 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 PRDM4Q9UKN5 801 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 MYH7BA7E2Y1 1941 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 ITIH6Q6UXX5 1313 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 TMEM265A0A087WTH1 108 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 A0A087WWV3 80 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 A0A1B0GTH6 734 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 ACTN4O43707 911 aaKnown RBP10.01□□□□□ -0.81
COL12A1-208ENST00000486533 KIF5CO60282 957 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 SORBS3O60504 671 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 FGBP02675 491 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 ATP1A3P13637 1013 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 PGM5Q15124 567 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 DGKDQ16760 1214 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 ARHGAP29Q52LW3 1261 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 DHX37Q8IY37 1157 aaKnown RBP10.01□□□□□ -0.81
COL12A1-208ENST00000486533 RPUSD2Q8IZ73 545 aaKnown RBP10.01□□□□□ -0.81
COL12A1-208ENST00000486533 SAMD3Q8N6K7 520 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 CEP112Q8N8E3 955 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 IQUBQ8NA54 791 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 IL31RAQ8NI17 732 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 MYLIPQ8WY64 445 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 GOLGA1Q92805 767 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 CCDC47Q96A33 483 aaKnown RBP10.01□□□□□ -0.81
COL12A1-208ENST00000486533 RRP36Q96EU6 259 aaKnown RBP10.01□□□□□ -0.81
COL12A1-208ENST00000486533 CLIC6Q96NY7 704 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 GBP3Q9H0R5 595 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 GJB4Q9NTQ9 266 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 MYO1AQ9UBC5 1043 aa10.01□□□□□ -0.81
COL12A1-208ENST00000486533 CHD7Q9P2D1 2997 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 MYO9BQ13459 2157 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 GRXCR1A8MXD5 290 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 ERLIN1O75477 346 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 MYL1P05976 194 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 CCND2P30279 289 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 PPP1R2P41236 205 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 GNAQP50148 359 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 LAMC2Q13753 1193 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 RASIP1Q5U651 963 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 ISM2Q6H9L7 571 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 DEFB128Q7Z7B8 93 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 VSIG10LQ86VR7 867 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 REXO1L1PQ8IX06 675 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 SPATA20Q8TB22 786 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 HERVK_113Q902F9 699 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 RABGGTAQ92696 567 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 TIFAQ96CG3 184 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 PBX4Q9BYU1 374 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 HSD3B7Q9H2F3 369 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 FAM53CQ9NYF3 392 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 CXXC1Q9P0U4 656 aaPredicted RBP10□□□□□ -0.81
COL12A1-208ENST00000486533 SCN5AQ14524 2016 aa10□□□□□ -0.81
COL12A1-208ENST00000486533 ZBBXA8MT70 800 aa9.99□□□□□ -0.81
COL12A1-208ENST00000486533 TADA3O75528 432 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms