RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 NEDD4P46934 1319 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 C2orf16Q68DN1 1984 aa11.27□□□□□ -0.61
SND1-213ENST00000486037 ZFYVE26Q68DK2 2539 aa11.27□□□□□ -0.61
SND1-213ENST00000486037 GSTTP1A0A1W2PQM5 241 aa11.27□□□□□ -0.61
SND1-213ENST00000486037 C9IYK1 514 aa11.27□□□□□ -0.61
SND1-213ENST00000486037 DHX16O60231 1041 aaKnown RBP11.27□□□□□ -0.61
SND1-213ENST00000486037 LAG3P18627 525 aa11.27□□□□□ -0.61
SND1-213ENST00000486037 TGM1P22735 817 aa11.27□□□□□ -0.61
SND1-213ENST00000486037 ANP32AP39687 249 aaKnown RBP11.27□□□□□ -0.61
SND1-213ENST00000486037 NFX1Q12986 1120 aaKnown RBP11.27□□□□□ -0.61
SND1-213ENST00000486037 COL9A3Q14050 684 aaPredicted RBP11.27□□□□□ -0.61
SND1-213ENST00000486037 NEDD9Q14511 834 aa11.27□□□□□ -0.61
SND1-213ENST00000486037 VARS2Q5ST30 1063 aaKnown RBP11.27□□□□□ -0.61
SND1-213ENST00000486037 KCNT2Q6UVM3 1135 aa11.27□□□□□ -0.61
SND1-213ENST00000486037 C1orf210Q8IVY1 113 aa11.27□□□□□ -0.61
SND1-213ENST00000486037 STAG2Q8N3U4 1231 aa11.27□□□□□ -0.61
SND1-213ENST00000486037 MRPL43Q8N983 215 aaKnown RBP11.27□□□□□ -0.61
SND1-213ENST00000486037 TMEM40Q8WWA1 233 aa11.27□□□□□ -0.61
SND1-213ENST00000486037 ADAM2Q99965 735 aa11.27□□□□□ -0.61
SND1-213ENST00000486037 SQORQ9Y6N5 450 aa11.27□□□□□ -0.61
SND1-213ENST00000486037 ATP9AO75110 1047 aa11.26□□□□□ -0.61
SND1-213ENST00000486037 TBC1D8BQ0IIM8 1120 aa11.26□□□□□ -0.61
SND1-213ENST00000486037 ALX1Q15699 326 aa11.26□□□□□ -0.61
SND1-213ENST00000486037 ATAT1Q5SQI0 421 aa11.26□□□□□ -0.61
SND1-213ENST00000486037 ZC3H14Q6PJT7 736 aaKnown RBP11.26□□□□□ -0.61
SND1-213ENST00000486037 MAP4K1Q92918 833 aa11.26□□□□□ -0.61
SND1-213ENST00000486037 CASD1Q96PB1 797 aa11.26□□□□□ -0.61
SND1-213ENST00000486037 PCYT2Q99447 389 aa11.26□□□□□ -0.61
SND1-213ENST00000486037 AMNQ9BXJ7 453 aa11.26□□□□□ -0.61
SND1-213ENST00000486037 CELF4Q9BZC1 486 aaKnown RBP11.26□□□□□ -0.61
SND1-213ENST00000486037 PARD6AQ9NPB6 346 aa11.26□□□□□ -0.61
SND1-213ENST00000486037 NCDNQ9UBB6 729 aa11.26□□□□□ -0.61
SND1-213ENST00000486037 PUF60Q9UHX1 559 aaKnown RBP11.26□□□□□ -0.61
SND1-213ENST00000486037 CDV3Q9UKY7 258 aaKnown RBP11.26□□□□□ -0.61
SND1-213ENST00000486037 NOC2LQ9Y3T9 749 aaKnown RBP11.26□□□□□ -0.61
SND1-213ENST00000486037 PCDHA1Q9Y5I3 950 aa11.26□□□□□ -0.61
SND1-213ENST00000486037 FRMPD4Q14CM0 1322 aa11.26□□□□□ -0.61
SND1-213ENST00000486037 ANKRD11Q6UB99 2663 aaPredicted RBP11.25□□□□□ -0.61
SND1-213ENST00000486037 FIBPO43427 364 aa11.25□□□□□ -0.61
SND1-213ENST00000486037 KINO60870 393 aaKnown RBP11.25□□□□□ -0.61
SND1-213ENST00000486037 INSRRP14616 1297 aa11.25□□□□□ -0.61
SND1-213ENST00000486037 HSPA4P34932 840 aa11.25□□□□□ -0.61
SND1-213ENST00000486037 CA8P35219 290 aa11.25□□□□□ -0.61
SND1-213ENST00000486037 SMC1AQ14683 1233 aaKnown RBP11.25□□□□□ -0.61
SND1-213ENST00000486037 ACAP1Q15027 740 aa11.25□□□□□ -0.61
SND1-213ENST00000486037 IER5Q5VY09 327 aa11.25□□□□□ -0.61
SND1-213ENST00000486037 XRRA1Q6P2D8 792 aa11.25□□□□□ -0.61
SND1-213ENST00000486037 ST13P5Q8NFI4 369 aaPredicted RBP11.25□□□□□ -0.61
SND1-213ENST00000486037 SLC22A17Q8WUG5 538 aa11.25□□□□□ -0.61
SND1-213ENST00000486037 MTMR8Q96EF0 704 aa11.25□□□□□ -0.61
SND1-213ENST00000486037 FOXQ1Q9C009 403 aa11.25□□□□□ -0.61
SND1-213ENST00000486037 RGS18Q9NS28 235 aa11.25□□□□□ -0.61
SND1-213ENST00000486037 WNT16Q9UBV4 365 aa11.25□□□□□ -0.61
SND1-213ENST00000486037 RBM8AQ9Y5S9 174 aaKnown RBP11.25□□□□□ -0.61
SND1-213ENST00000486037 NT5C1B-RDH14C9J2C7 533 aa11.24□□□□□ -0.61
SND1-213ENST00000486037 GCOM1H8Y6P7 765 aaPredicted RBP11.24□□□□□ -0.61
SND1-213ENST00000486037 POLR2MP0CAP2 368 aa11.24□□□□□ -0.61
SND1-213ENST00000486037 NECTIN1Q15223 517 aa11.24□□□□□ -0.61
SND1-213ENST00000486037 GNPTABQ3T906 1256 aa11.24□□□□□ -0.61
SND1-213ENST00000486037 ASPRV1Q53RT3 343 aa11.24□□□□□ -0.61
SND1-213ENST00000486037 PPM1JQ5JR12 505 aa11.24□□□□□ -0.61
SND1-213ENST00000486037 TMEM173Q86WV6 379 aaPredicted RBP11.24□□□□□ -0.61
SND1-213ENST00000486037 DGKHQ86XP1 1220 aa11.24□□□□□ -0.61
SND1-213ENST00000486037 SLC39A11Q8N1S5 342 aa11.24□□□□□ -0.61
SND1-213ENST00000486037 GPR152Q8TDT2 470 aa11.24□□□□□ -0.61
SND1-213ENST00000486037 COL26A1Q96A83 441 aa11.24□□□□□ -0.61
SND1-213ENST00000486037 ACSF2Q96CM8 615 aaPredicted RBP11.24□□□□□ -0.61
SND1-213ENST00000486037 ZNF558Q96NG5 402 aa11.24□□□□□ -0.61
SND1-213ENST00000486037 RTKNQ9BST9 563 aa11.24□□□□□ -0.61
SND1-213ENST00000486037 MAP3K20Q9NYL2 800 aaKnown RBP11.24□□□□□ -0.61
SND1-213ENST00000486037 KDM3AQ9Y4C1 1321 aa11.24□□□□□ -0.61
SND1-213ENST00000486037 BAZ2BQ9UIF8 2168 aaKnown RBP11.23□□□□□ -0.61
SND1-213ENST00000486037 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.23□□□□□ -0.61
SND1-213ENST00000486037 DENND3A2RUS2 1198 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 ZBTB5O15062 677 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 CXCL14O95715 111 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 PARP1P09874 1014 aaKnown RBP11.23□□□□□ -0.61
SND1-213ENST00000486037 KCNA2P16389 499 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 RFX1P22670 979 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 FAM189BP81408 668 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 KRT76Q01546 638 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 PLCB4Q15147 1175 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 CCDC149Q6ZUS6 474 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 SLC24A5Q71RS6 500 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 OTOP3Q7RTS5 596 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 GPR149Q86SP6 731 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 GLG1Q92896 1179 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 KCNB2Q92953 911 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 PPP1R16BQ96T49 567 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 SENP7Q9BQF6 1050 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 DSCC1Q9BVC3 393 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 KAT14Q9H8E8 782 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 ATP6V0A4Q9HBG4 840 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 DZANK1Q9NVP4 752 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 TMEM161AQ9NX61 479 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 ERAP1Q9NZ08 941 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 SPG21Q9NZD8 308 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 ST3GAL5Q9UNP4 418 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 GINS2Q9Y248 185 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms