RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 SLC9A2Q9UBY0 812 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 DDX20Q9UHI6 824 aaKnown RBP6.34□□□□□ -1.39
COPS3-208ENST00000486032 CFAP45Q9UL16 551 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 CEP131Q9UPN4 1083 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 TELO2Q9Y4R8 837 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 ATP6V1DQ9Y5K8 247 aa6.34□□□□□ -1.39
COPS3-208ENST00000486032 KIAA0100Q14667 2235 aaKnown RBP6.34□□□□□ -1.39
COPS3-208ENST00000486032 MYH15Q9Y2K3 1946 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 SYNRGQ9UMZ2 1314 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 CYP3A7-CYP3A51PA0A087WV96 503 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 RBM47A0AV96 593 aaKnown RBP6.33□□□□□ -1.4
COPS3-208ENST00000486032 MYADML2A6NDP7 307 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 BACH1O14867 736 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 NKRFO15226 690 aaKnown RBP eCLIP6.33□□□□□ -1.4
COPS3-208ENST00000486032 SPTLC2O15270 562 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 MAFGO15525 162 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 DUSP11O75319 330 aaKnown RBP6.33□□□□□ -1.4
COPS3-208ENST00000486032 FARP2O94887 1054 aaPredicted RBP6.33□□□□□ -1.4
COPS3-208ENST00000486032 TGFB3P10600 412 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 CYP3A7P24462 503 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 RGS19P49795 217 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 ARHGAP1Q07960 439 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 LAMC2Q13753 1193 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 HSDL1Q3SXM5 330 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 BRDTQ58F21 947 aaPredicted RBP6.33□□□□□ -1.4
COPS3-208ENST00000486032 GNASQ5JWF2 1037 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 SPECC1Q5M775 1068 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 CELF3Q5SZQ8 465 aaKnown RBP6.33□□□□□ -1.4
COPS3-208ENST00000486032 PPP1R26Q5T8A7 1209 aaPredicted RBP6.33□□□□□ -1.4
COPS3-208ENST00000486032 CCDC62Q6P9F0 684 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 DTHD1Q6ZMT9 781 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 UBE2Q1Q7Z7E8 422 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 CKAP2LQ8IYA6 745 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 SLFN12Q8IYM2 578 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 C4orf32Q8N8J7 132 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 GIMAP8Q8ND71 665 aaPredicted RBP6.33□□□□□ -1.4
COPS3-208ENST00000486032 ETNPPLQ8TBG4 499 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 HAS1Q92839 578 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 TNPO1Q92973 898 aaKnown RBP6.33□□□□□ -1.4
COPS3-208ENST00000486032 VTI1AQ96AJ9 217 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 SPATA32Q96LK8 384 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 FAM20AQ96MK3 541 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 MBOAT7Q96N66 472 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 CLIC6Q96NY7 704 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 PLIN2Q99541 437 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 C1QTNF2Q9BXJ5 285 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 JPH1Q9HDC5 661 aaPredicted RBP6.33□□□□□ -1.4
COPS3-208ENST00000486032 PAK6Q9NQU5 681 aaPredicted RBP6.33□□□□□ -1.4
COPS3-208ENST00000486032 NRBP1Q9UHY1 535 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 PCDHA12Q9UN75 941 aa6.33□□□□□ -1.4
COPS3-208ENST00000486032 GNEQ9Y223 722 aaKnown RBP6.33□□□□□ -1.4
COPS3-208ENST00000486032 A0A087WWV3 80 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 GSTTP1A0A1W2PQM5 241 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 PP2D1A8MPX8 630 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 KBTBD13C9JR72 458 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 EML1O00423 815 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 TBX3O15119 743 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 DHX15O43143 795 aaKnown RBP6.32□□□□□ -1.4
COPS3-208ENST00000486032 ZEB2O60315 1214 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 MSCO60682 206 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 YEATS4O95619 227 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 BMP15O95972 392 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 CCNE2O96020 404 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 ZNF286BP0CG31 522 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 MARK3P27448 753 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 CDC25AP30304 524 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 TCF7P36402 384 aaPredicted RBP6.32□□□□□ -1.4
COPS3-208ENST00000486032 ME1P48163 572 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 CPT1AP50416 773 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 ACTR2P61160 394 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 ATP2C1P98194 919 aaPredicted RBP6.32□□□□□ -1.4
COPS3-208ENST00000486032 MDM2Q00987 491 aaPredicted RBP6.32□□□□□ -1.4
COPS3-208ENST00000486032 CYP4A11Q02928 519 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 GRIN1Q05586 938 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 ORC2Q13416 577 aaPredicted RBP6.32□□□□□ -1.4
COPS3-208ENST00000486032 CTTNQ14247 550 aaKnown RBP6.32□□□□□ -1.4
COPS3-208ENST00000486032 PTPAQ15257 358 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 LRRC41Q15345 812 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 KCNA10Q16322 511 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 FSCN1Q16658 493 aaKnown RBP6.32□□□□□ -1.4
COPS3-208ENST00000486032 SWSAP1Q6NVH7 229 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 METTL7BQ6UX53 244 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 RNF180Q86T96 592 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 TRIM50Q86XT4 487 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 LINC00301Q8NCQ3 95 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 BANK1Q8NDB2 785 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 RASSF8Q8NHQ8 419 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 U2AF1L4Q8WU68 220 aaKnown RBP6.32□□□□□ -1.4
COPS3-208ENST00000486032 SEPT1Q8WYJ6 367 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 GLG1Q92896 1179 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 SLC5A5Q92911 643 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 FERMT2Q96AC1 680 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 DYDC2Q96IM9 177 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 MTMR9Q96QG7 549 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 GPR20Q99678 358 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 SENP7Q9BQF6 1050 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 PANK2Q9BZ23 570 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 CSRNP2Q9H175 543 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 KCNMB3Q9NPA1 279 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 DISC1Q9NRI5 854 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms