RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 DNM3Q9UQ16 869 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 TANC1Q9C0D5 1861 aa17.27■□□□□ 0.35
RPUSD3-217ENST00000485705 SIP14410 1827 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 IGKV6-21A0A0C4DH24 114 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 SLC26A4O43511 780 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 TIMP1P01033 207 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 RAG1P15918 1043 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 CCL23P55773 120 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 TMEM62Q0P6H9 643 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 ZNF618Q5T7W0 954 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 TAF2Q6P1X5 1199 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 TRAF7Q6Q0C0 670 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 RASSF8Q8NHQ8 419 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 CAGE1Q8TC20 777 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 CCDC43Q96MW1 224 aaKnown RBP17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 NT5C3AQ9H0P0 336 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 XPNPEP1Q9NQW7 623 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 BLOC1S4Q9NUP1 217 aa17.26■□□□□ 0.35
RPUSD3-217ENST00000485705 ARHGEF35A5YM69 484 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 USO1O60763 962 aaKnown RBP17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 EYA4O95677 639 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 VTNP04004 478 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 CTSHP09668 335 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 RFC5P40937 340 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 POLGP54098 1239 aaPredicted RBP17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 RBL2Q08999 1139 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 BFSP2Q13515 415 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 EMC2Q15006 297 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 RESP18Q5W5W9 173 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 ADALQ6DHV7 355 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 PADI6Q6TGC4 694 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 PDILTQ8N807 584 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 TMEM143Q96AN5 459 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 SCLYQ96I15 445 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 PPP1R16BQ96T49 567 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 OSBPL7Q9BZF2 842 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 PRKAG2Q9UGJ0 569 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 MYH11P35749 1972 aa17.25■□□□□ 0.35
RPUSD3-217ENST00000485705 H0YGN5 161 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 PITPNM1O00562 1244 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 CHRNA1P02708 482 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 PLA2G4BP0C869 781 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 TXLNAP40222 546 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 SLC12A3P55017 1021 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 MBTPS1Q14703 1052 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 NAALADL2Q58DX5 795 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 RRAGBQ5VZM2 374 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 MAEAQ7L5Y9 396 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 RPAINQ86UA6 219 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 RETREG2Q8NC44 543 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 BADQ92934 168 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 ZNF668Q96K58 619 aaPredicted RBP17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 POLD4Q9HCU8 107 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 CCDC39Q9UFE4 941 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 PPME1Q9Y570 386 aa17.24■□□□□ 0.35
RPUSD3-217ENST00000485705 DGAT1O75907 488 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 SSBP05455 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 IQCF3P0C7M6 154 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 SELPP16109 830 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 MRPS6P82932 125 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 MDM2Q00987 491 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 MGAT3Q09327 533 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 DHX8Q14562 1220 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 MCM6Q14566 821 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 GPNMBQ14956 572 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 LRRC8DQ7L1W4 858 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 CCDC155Q8N6L0 562 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 SYT2Q8N9I0 419 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 SLC7A3Q8WY07 619 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 RAD54LQ92698 747 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 MTRQ99707 1265 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 RUSC1Q9BVN2 902 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 ATP6V0A4Q9HBG4 840 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 GPRC5CQ9NQ84 441 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 SUCLA2Q9P2R7 463 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 AKT3Q9Y243 479 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 CDY2AQ9Y6F7 541 aa17.23■□□□□ 0.35
RPUSD3-217ENST00000485705 A0A1B0GVL5 298 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 RSPH10B2B2RC85 870 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 RSPH10BP0C881 870 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 CYP11B2P19099 503 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 CMA1P23946 247 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 TMOD1P28289 359 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 FAM26DQ5JW98 314 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 MFSD5Q6N075 450 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 RINT1Q6NUQ1 792 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 RSPH3Q86UC2 560 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 KSR1Q8IVT5 923 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 KCTD17Q8N5Z5 321 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 VWCEQ96DN2 955 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 JPH2Q9BR39 696 aaPredicted RBP17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 CDHR5Q9HBB8 845 aa17.22■□□□□ 0.35
RPUSD3-217ENST00000485705 CAND2O75155 1236 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 GPR32O75388 356 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 CSF2RAP15509 400 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 PFKFB1P16118 471 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 STAT6P42226 847 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 NLRP11P59045 1033 aaKnown RBP17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 E2F4Q16254 413 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 KIZQ2M2Z5 673 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms