RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.65■□□□□ 0.9
DDR1-245ENST00000484556 SMIM35A0A1B0GVV1 85 aa20.65■□□□□ 0.9
DDR1-245ENST00000484556 PALM3A6NDB9 673 aaPredicted RBP20.65■□□□□ 0.9
DDR1-245ENST00000484556 USP17L6PQ6QN14 398 aa20.65■□□□□ 0.9
DDR1-245ENST00000484556 CCDC149Q6ZUS6 474 aa20.65■□□□□ 0.9
DDR1-245ENST00000484556 OTOP3Q7RTS5 596 aa20.65■□□□□ 0.9
DDR1-245ENST00000484556 SUMF1Q8NBK3 374 aa20.65■□□□□ 0.9
DDR1-245ENST00000484556 PIBF1Q8WXW3 757 aa20.65■□□□□ 0.9
DDR1-245ENST00000484556 TBC1D17Q9HA65 648 aa20.65■□□□□ 0.9
DDR1-245ENST00000484556 CXCL14O95715 111 aa20.64■□□□□ 0.89
DDR1-245ENST00000484556 TRAF1Q13077 416 aa20.64■□□□□ 0.89
DDR1-245ENST00000484556 MTHFD1LQ6UB35 978 aa20.64■□□□□ 0.89
DDR1-245ENST00000484556 SLC39A11Q8N1S5 342 aa20.64■□□□□ 0.89
DDR1-245ENST00000484556 SMARCC2Q8TAQ2 1214 aa20.64■□□□□ 0.89
DDR1-245ENST00000484556 RSAD2Q8WXG1 361 aa20.64■□□□□ 0.89
DDR1-245ENST00000484556 GPRASP2Q96D09 838 aa20.64■□□□□ 0.89
DDR1-245ENST00000484556 UBAC1Q9BSL1 405 aa20.64■□□□□ 0.89
DDR1-245ENST00000484556 NT5C1B-RDH14C9J2C7 533 aa20.63■□□□□ 0.89
DDR1-245ENST00000484556 CYTH3O43739 400 aa20.63■□□□□ 0.89
DDR1-245ENST00000484556 METAP2P50579 478 aaKnown RBP eCLIP20.63■□□□□ 0.899e-6■■■■□ 23.9
DDR1-245ENST00000484556 TBC1D8BQ0IIM8 1120 aa20.63■□□□□ 0.89
DDR1-245ENST00000484556 FAM228AQ86W67 206 aa20.63■□□□□ 0.89
DDR1-245ENST00000484556 NME8Q8N427 588 aa20.63■□□□□ 0.89
DDR1-245ENST00000484556 RIOX1Q9H6W3 641 aa20.63■□□□□ 0.89
DDR1-245ENST00000484556 ELAC1Q9H777 363 aaKnown RBP20.63■□□□□ 0.89
DDR1-245ENST00000484556 NCDNQ9UBB6 729 aa20.63■□□□□ 0.89
DDR1-245ENST00000484556 EVPLQ92817 2033 aa20.62■□□□□ 0.89
DDR1-245ENST00000484556 PNMA6FA0A0J9YX94 578 aa20.62■□□□□ 0.89
DDR1-245ENST00000484556 DCDC2BA2VCK2 349 aa20.62■□□□□ 0.89
DDR1-245ENST00000484556 POTEMA6NI47 508 aa20.62■□□□□ 0.89
DDR1-245ENST00000484556 ITGB5P18084 799 aa20.62■□□□□ 0.89
DDR1-245ENST00000484556 FAM189BP81408 668 aa20.62■□□□□ 0.89
DDR1-245ENST00000484556 KIAA0319Q5VV43 1072 aa20.62■□□□□ 0.89
DDR1-245ENST00000484556 POTEGQ6S5H5 508 aa20.62■□□□□ 0.89
DDR1-245ENST00000484556 CABP7Q86V35 215 aa20.62■□□□□ 0.89
DDR1-245ENST00000484556 ABI1Q8IZP0 508 aa20.62■□□□□ 0.89
DDR1-245ENST00000484556 TMEM87AQ8NBN3 555 aa20.62■□□□□ 0.89
DDR1-245ENST00000484556 AZI2Q9H6S1 392 aa20.62■□□□□ 0.89
DDR1-245ENST00000484556 WNT16Q9UBV4 365 aa20.62■□□□□ 0.89
DDR1-245ENST00000484556 SPDYE4A6NLX3 237 aa20.61■□□□□ 0.89
DDR1-245ENST00000484556 GPR182O15218 404 aa20.61■□□□□ 0.89
DDR1-245ENST00000484556 KINO60870 393 aaKnown RBP20.61■□□□□ 0.89
DDR1-245ENST00000484556 GPR149Q86SP6 731 aa20.61■□□□□ 0.89
DDR1-245ENST00000484556 C1orf210Q8IVY1 113 aa20.61■□□□□ 0.89
DDR1-245ENST00000484556 SLC22A17Q8WUG5 538 aa20.61■□□□□ 0.89
DDR1-245ENST00000484556 CDHR1Q96JP9 859 aa20.61■□□□□ 0.89
DDR1-245ENST00000484556 OSMRQ99650 979 aa20.61■□□□□ 0.89
DDR1-245ENST00000484556 DLGAP2Q9P1A6 1054 aa20.61■□□□□ 0.89
DDR1-245ENST00000484556 CACNA1IQ9P0X4 2223 aa20.6■□□□□ 0.89
DDR1-245ENST00000484556 N4BP1O75113 896 aaKnown RBP20.6■□□□□ 0.89
DDR1-245ENST00000484556 NT5C2P49902 561 aa20.6■□□□□ 0.89
DDR1-245ENST00000484556 MTMR1Q13613 665 aa20.6■□□□□ 0.89
DDR1-245ENST00000484556 DSC3Q14574 896 aa20.6■□□□□ 0.89
DDR1-245ENST00000484556 GRM4Q14833 912 aa20.6■□□□□ 0.89
DDR1-245ENST00000484556 SEC23AQ15436 765 aa20.6■□□□□ 0.89
DDR1-245ENST00000484556 VPS52Q8N1B4 723 aa20.6■□□□□ 0.89
DDR1-245ENST00000484556 RNF169Q8NCN4 708 aa20.6■□□□□ 0.89
DDR1-245ENST00000484556 CUL5Q93034 780 aa20.6■□□□□ 0.89
DDR1-245ENST00000484556 ZBP1Q9H171 429 aa20.6■□□□□ 0.89
DDR1-245ENST00000484556 IGSF9Q9P2J2 1179 aa20.6■□□□□ 0.89
DDR1-245ENST00000484556 CDV3Q9UKY7 258 aaKnown RBP20.6■□□□□ 0.89
DDR1-245ENST00000484556 MEIS2O14770 477 aa20.59■□□□□ 0.89
DDR1-245ENST00000484556 HOXA2O43364 376 aa20.59■□□□□ 0.89
DDR1-245ENST00000484556 KLRC1P26715 233 aa20.59■□□□□ 0.89
DDR1-245ENST00000484556 KIZQ2M2Z5 673 aa20.59■□□□□ 0.89
DDR1-245ENST00000484556 CLLU1OSQ5K130 101 aa20.59■□□□□ 0.89
DDR1-245ENST00000484556 VARS2Q5ST30 1063 aaKnown RBP20.59■□□□□ 0.89
DDR1-245ENST00000484556 ODR4Q5SWX8 454 aa20.59■□□□□ 0.89
DDR1-245ENST00000484556 TMEM173Q86WV6 379 aaPredicted RBP20.59■□□□□ 0.89
DDR1-245ENST00000484556 KIAA0319LQ8IZA0 1049 aa20.59■□□□□ 0.89
DDR1-245ENST00000484556 CHAMP1Q96JM3 812 aa20.59■□□□□ 0.89
DDR1-245ENST00000484556 SFXN1Q9H9B4 322 aa20.59■□□□□ 0.89
DDR1-245ENST00000484556 JPH1Q9HDC5 661 aaPredicted RBP20.59■□□□□ 0.89
DDR1-245ENST00000484556 SDHBP21912 280 aa20.58■□□□□ 0.89
DDR1-245ENST00000484556 COL9A2Q14055 689 aaPredicted RBP20.58■□□□□ 0.89
DDR1-245ENST00000484556 GPR152Q8TDT2 470 aa20.58■□□□□ 0.89
DDR1-245ENST00000484556 TNPO1Q92973 898 aaKnown RBP20.58■□□□□ 0.89
DDR1-245ENST00000484556 TMEM169Q96HH4 297 aa20.58■□□□□ 0.89
DDR1-245ENST00000484556 SLC9A2Q9UBY0 812 aa20.58■□□□□ 0.89
DDR1-245ENST00000484556 SIT1Q9Y3P8 196 aa20.58■□□□□ 0.89
DDR1-245ENST00000484556 MIA3Q5JRA6 1907 aa20.57■□□□□ 0.88
DDR1-245ENST00000484556 LRRN2O75325 713 aa20.57■□□□□ 0.88
DDR1-245ENST00000484556 ADRB1P08588 477 aa20.57■□□□□ 0.88
DDR1-245ENST00000484556 GLULP15104 373 aa20.57■□□□□ 0.88
DDR1-245ENST00000484556 STAT5BP51692 787 aa20.57■□□□□ 0.88
DDR1-245ENST00000484556 BCAR1P56945 870 aa20.57■□□□□ 0.88
DDR1-245ENST00000484556 BMS1Q14692 1282 aaKnown RBP20.57■□□□□ 0.88
DDR1-245ENST00000484556 LETM2Q2VYF4 491 aa20.57■□□□□ 0.88
DDR1-245ENST00000484556 CYB5R4Q7L1T6 521 aa20.57■□□□□ 0.88
DDR1-245ENST00000484556 MAML2Q8IZL2 1156 aaPredicted RBP20.57■□□□□ 0.88
DDR1-245ENST00000484556 HELQQ8TDG4 1101 aa20.57■□□□□ 0.88
DDR1-245ENST00000484556 FOXQ1Q9C009 403 aa20.57■□□□□ 0.88
DDR1-245ENST00000484556 KRT23Q9C075 422 aa20.57■□□□□ 0.88
DDR1-245ENST00000484556 UBIAD1Q9Y5Z9 338 aa20.57■□□□□ 0.88
DDR1-245ENST00000484556 PATJQ8NI35 1801 aa20.56■□□□□ 0.88
DDR1-245ENST00000484556 GBP2P32456 591 aaPredicted RBP20.56■□□□□ 0.88
DDR1-245ENST00000484556 ACTR2P61160 394 aa20.56■□□□□ 0.88
DDR1-245ENST00000484556 ECHDC2Q86YB7 292 aa20.56■□□□□ 0.88
DDR1-245ENST00000484556 COL4A3Q01955 1670 aa20.56■□□□□ 0.88
DDR1-245ENST00000484556 PIK3CDO00329 1044 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms