RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 CNTNAP3BQ96NU0 1288 aa7.07□□□□□ -1.28
PTCD3-215ENST00000484203 INPP4AQ96PE3 977 aaPredicted RBP7.07□□□□□ -1.28
PTCD3-215ENST00000484203 SENP7Q9BQF6 1050 aa7.07□□□□□ -1.28
PTCD3-215ENST00000484203 USP26Q9BXU7 913 aa7.07□□□□□ -1.28
PTCD3-215ENST00000484203 CNTNAP3Q9BZ76 1288 aa7.07□□□□□ -1.28
PTCD3-215ENST00000484203 TRPV6Q9H1D0 765 aa7.07□□□□□ -1.28
PTCD3-215ENST00000484203 PSTPIP2Q9H939 334 aa7.07□□□□□ -1.28
PTCD3-215ENST00000484203 COL20A1Q9P218 1284 aa7.07□□□□□ -1.28
PTCD3-215ENST00000484203 MSRAQ9UJ68 235 aa7.07□□□□□ -1.28
PTCD3-215ENST00000484203 PCDHGC4Q9Y5F7 938 aa7.07□□□□□ -1.28
PTCD3-215ENST00000484203 GRIN2DO15399 1336 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 FRMPD4Q14CM0 1322 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 MYH8P13535 1937 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 KIF28PB7ZC32 967 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 OPLAHO14841 1288 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 ZBTB43O43298 467 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 BNIP3LO60238 219 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 CAND2O75155 1236 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 BAIAP3O94812 1187 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 F2P00734 622 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 HOXA13P31271 388 aaPredicted RBP7.06□□□□□ -1.28
PTCD3-215ENST00000484203 CYP2C18P33260 490 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 PSMC6P62333 389 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 RBL2Q08999 1139 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 PTGISQ16647 500 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 RTN1Q16799 776 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 LY6KQ17RY6 165 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 RNFT1Q5M7Z0 435 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 RASIP1Q5U651 963 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 METTL7BQ6UX53 244 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 TMTC3Q6ZXV5 915 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 ZNF365Q70YC5 407 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 FBXL16Q8N461 479 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 SLC17A8Q8NDX2 589 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 PHOSPHO2Q8TCD6 241 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 AFAP1L1Q8TED9 768 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 CCDC12Q8WUD4 166 aaPredicted RBP7.06□□□□□ -1.28
PTCD3-215ENST00000484203 TIFAQ96CG3 184 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 GPRASP2Q96D09 838 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 ABHD17AQ96GS6 310 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 HSH2DQ96JZ2 352 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.06□□□□□ -1.285e-13■□□□□ 9.5
PTCD3-215ENST00000484203 SEMA6BQ9H3T3 888 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 TRMT13Q9NUP7 481 aaKnown RBP7.06□□□□□ -1.28
PTCD3-215ENST00000484203 ZNF215Q9UL58 517 aaPredicted RBP7.06□□□□□ -1.28
PTCD3-215ENST00000484203 USTQ9Y2C2 406 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 SLC4A7Q9Y6M7 1214 aa7.06□□□□□ -1.28
PTCD3-215ENST00000484203 LAMA2P24043 3122 aaKnown RBP7.06□□□□□ -1.28
PTCD3-215ENST00000484203 EMSYQ7Z589 1322 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 DCDC2BA2VCK2 349 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 KHNYNO15037 678 aaKnown RBP7.05□□□□□ -1.28
PTCD3-215ENST00000484203 ARIH2O95376 493 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 GGPS1O95749 300 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 SELPP16109 830 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 MX2P20592 715 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 UBA1P22314 1058 aaKnown RBP7.05□□□□□ -1.28
PTCD3-215ENST00000484203 EPHB4P54760 987 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 CCL23P55773 120 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 KRT76Q01546 638 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 EXOSC10Q01780 885 aaKnown RBP7.05□□□□□ -1.28
PTCD3-215ENST00000484203 GAS6Q14393 721 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 HIF1AQ16665 826 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 APOA5Q6Q788 366 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 CAPN12Q6ZSI9 719 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 MICU3Q86XE3 530 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 SRBD1Q8N5C6 995 aaKnown RBP7.05□□□□□ -1.28
PTCD3-215ENST00000484203 COPS5Q92905 334 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 SUSD3Q96L08 255 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 GTF2IRD1Q9UHL9 959 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 ATXN7L1Q9ULK2 861 aaPredicted RBP7.05□□□□□ -1.28
PTCD3-215ENST00000484203 TAF6LQ9Y6J9 622 aa7.05□□□□□ -1.28
PTCD3-215ENST00000484203 DDX49Q9Y6V7 483 aaKnown RBP7.05□□□□□ -1.28
PTCD3-215ENST00000484203 H3BRB1 525 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 HAS3O00219 553 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 MEIS2O14770 477 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 IQCF3P0C7M6 154 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 CYP2C9P11712 490 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 ATP2A2P16615 1042 aaKnown RBP7.04□□□□□ -1.28
PTCD3-215ENST00000484203 HSPA4P34932 840 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 KCNJ6P48051 423 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 AKAP17AQ02040 695 aaKnown RBP7.04□□□□□ -1.28
PTCD3-215ENST00000484203 AP3B2Q13367 1082 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 NAA30Q147X3 362 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-215ENST00000484203 KIAA0753Q2KHM9 967 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 SLC35G1Q2M3R5 365 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 BLOC1S2Q6QNY1 142 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 Q7L0L9 218 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 C16orf59Q7L2K0 433 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 HEATR3Q7Z4Q2 680 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 FAM177A1Q8N128 213 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-215ENST00000484203 BICD2Q8TD16 824 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 PIBF1Q8WXW3 757 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 KAT2BQ92831 832 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 KCNB2Q92953 911 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 SLC9A7Q96T83 725 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 CDX2Q99626 313 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-215ENST00000484203 FTOQ9C0B1 505 aaKnown RBP eCLIP7.04□□□□□ -1.28
PTCD3-215ENST00000484203 WNT8AQ9H1J5 351 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 ZNF576Q9H609 170 aa7.04□□□□□ -1.28
PTCD3-215ENST00000484203 TUT1Q9H6E5 874 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms