RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 MFSD5Q6N075 450 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 OTOP2Q7RTS6 562 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 TRMT1LQ7Z2T5 733 aaKnown RBP7.75□□□□□ -1.17
BRCA1-216ENST00000484087 TMCO2Q7Z6W1 182 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-216ENST00000484087 LUZP1Q86V48 1076 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 IQUBQ8NA54 791 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 RASSF8Q8NHQ8 419 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 SMARCE1Q969G3 411 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 EMID1Q96A84 441 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-216ENST00000484087 RNPC3Q96LT9 517 aaKnown RBP7.75□□□□□ -1.17
BRCA1-216ENST00000484087 BPIFA3Q9BQP9 254 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 MXRA8Q9BRK3 442 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 RAB34Q9BZG1 259 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 CXXC1Q9P0U4 656 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-216ENST00000484087 IGLV3-22A0A075B6J6 115 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 GSTTP1A0A1W2PQM5 241 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 HAS3O00219 553 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 TREHO43280 583 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 NEMFO60524 1076 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 CCNT1O60563 726 aaKnown RBP7.75□□□□□ -1.17
BRCA1-216ENST00000484087 TDP2O95551 362 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 CTSHP09668 335 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 OR52Z1P0C646 297 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 SLFN14P0C7P3 912 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 SREBF1P36956 1147 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 UBA7P41226 1012 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 FOXK1P85037 733 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 TMEM266Q2M3C6 531 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 BRDTQ58F21 947 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-216ENST00000484087 TMEM240Q5SV17 173 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 METTL7BQ6UX53 244 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 ZNF365Q70YC5 407 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 NLRX1Q86UT6 975 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 SAMD3Q8N6K7 520 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 PDILTQ8N807 584 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 C7orf31Q8N865 590 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 TRIML1Q8N9V2 468 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 TRAPPC12Q8WVT3 735 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 CRYGNQ8WXF5 182 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 SYMPKQ92797 1274 aaKnown RBP7.75□□□□□ -1.17
BRCA1-216ENST00000484087 DHX58Q96C10 678 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 AK8Q96MA6 479 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 PCYT2Q99447 389 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 TRIM5Q9C035 493 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 MAF1Q9H063 256 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 RNPEPQ9H4A4 650 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 JADE2Q9NQC1 790 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 KCNH7Q9NS40 1196 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 SETD4Q9NVD3 440 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 GTF2IRD1Q9UHL9 959 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 SERTAD1Q9UHV2 236 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 TUBE1Q9UJT0 475 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 NOD1Q9Y239 953 aa7.75□□□□□ -1.17
BRCA1-216ENST00000484087 VCANP13611 3396 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 SPTBN5Q9NRC6 3674 aaKnown RBP7.74□□□□□ -1.17
BRCA1-216ENST00000484087 MYH9P35579 1960 aaKnown RBP7.74□□□□□ -1.17
BRCA1-216ENST00000484087 H3BRB1 525 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 BIN1O00499 593 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 MARCH6O60337 910 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 CCNE2O96020 404 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 SMIM10L2AP0DMW4 78 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 SMIM10L2BP0DMW5 78 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 HOXD8P13378 290 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-216ENST00000484087 ZNF76P36508 570 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 IGBP1P78318 339 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 GRIN1Q05586 938 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 AP3B2Q13367 1082 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 PNOCQ13519 176 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 MBTPS1Q14703 1052 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 GPNMBQ14956 572 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 CEP55Q53EZ4 464 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 PRR16Q569H4 304 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 NFRKBQ6P4R8 1299 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 RUFY4Q6ZNE9 571 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 C11orf57Q6ZUT1 292 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-216ENST00000484087 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-216ENST00000484087 PLA2G4DQ86XP0 818 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 TEX2Q8IWB9 1127 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 DRC7Q8IY82 874 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 TBCKQ8TEA7 893 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 ERCC4Q92889 916 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-216ENST00000484087 GPRASP2Q96D09 838 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 EPSTI1Q96J88 318 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 TUT1Q9H6E5 874 aaKnown RBP7.74□□□□□ -1.17
BRCA1-216ENST00000484087 AGO4Q9HCK5 861 aaKnown RBP7.74□□□□□ -1.17
BRCA1-216ENST00000484087 XIRP2A4UGR9 3374 aa7.74□□□□□ -1.17
BRCA1-216ENST00000484087 MICAL3Q7RTP6 2002 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 EVPLQ92817 2033 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 COL4A4P53420 1690 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-216ENST00000484087 ZBBXA8MT70 800 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 ESPNB1AK53 854 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 WNT7AO00755 349 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 IKBKBO14920 756 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 CHMP2AO43633 222 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 ACTN4O43707 911 aaKnown RBP7.73□□□□□ -1.17
BRCA1-216ENST00000484087 STAM2O75886 525 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 TGFB3P10600 412 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 MYOGP15173 224 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 GCFC2P16383 781 aaKnown RBP7.73□□□□□ -1.17
BRCA1-216ENST00000484087 STAT6P42226 847 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms