RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ITGB3BPQ13352 177 aaPredicted RBP12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 KIZQ2M2Z5 673 aa12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 RARS2Q5T160 578 aaKnown RBP12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 CHD1LQ86WJ1 897 aa12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 SMC5Q8IY18 1101 aa12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 ZDHHC14Q8IZN3 488 aa12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 SRBD1Q8N5C6 995 aaKnown RBP12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 MRPL43Q8N983 215 aaKnown RBP12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 TDRD5Q8NAT2 981 aaKnown RBP12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 IGDCC4Q8TDY8 1250 aa12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 ZNF558Q96NG5 402 aa12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 OSMRQ99650 979 aa12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 TMEM117Q9H0C3 514 aa12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 ELAC1Q9H777 363 aaKnown RBP12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 SEC63Q9UGP8 760 aaKnown RBP12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 PCDHA6Q9UN73 950 aa12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 PCDHA8Q9Y5H6 950 aa12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 EPG5Q9HCE0 2579 aa12.43□□□□□ -0.42
SMARCC1-205ENST00000483847 DENND4AQ7Z401 1863 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 SPDYE3A6NKU9 549 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 ZBTB42B2RXF5 422 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 E7EWF7 191 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 GPR182O15218 404 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 ATG7O95352 703 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 CCNE2O96020 404 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 MTHFRP42898 656 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 KRT17Q04695 432 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 SMC1AQ14683 1233 aaKnown RBP12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 RALYLQ86SE5 291 aaKnown RBP12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 ZNF654Q8IZM8 581 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 CTCFLQ8NI51 663 aaPredicted RBP12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 TNPO1Q92973 898 aaKnown RBP12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 RMDN1Q96DB5 314 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 MXRA8Q9BRK3 442 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 SDF4Q9BRK5 362 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 SPG21Q9NZD8 308 aa12.42□□□□□ -0.42
SMARCC1-205ENST00000483847 NFASCO94856 1347 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 IGKV6D-21A0A0A0MT36 114 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 VTNP04004 478 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 EPCAMP16422 314 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 RXRAP19793 462 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 AOC1P19801 751 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 SMARCA1P28370 1054 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 CA8P35219 290 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 PPM1AP35813 382 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 CRYBB1P53674 252 aaPredicted RBP12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 SART3Q15020 963 aaKnown RBP12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 ANGPT1Q15389 498 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 CLLU1OSQ5K130 101 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 KIAA1841Q6NSI8 718 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 CCDC60Q8IWA6 550 aaPredicted RBP12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 CCDC105Q8IYK2 499 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 SLC39A11Q8N1S5 342 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 LRRC43Q8N309 656 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 NCOA7Q8NI08 942 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 AUTS2Q8WXX7 1259 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 PGBD1Q96JS3 809 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 LY9Q9HBG7 655 aa12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 AGO4Q9HCK5 861 aaKnown RBP12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 DBR1Q9UK59 544 aaKnown RBP12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 U3KPZ7 1027 aaPredicted RBP12.41□□□□□ -0.42
SMARCC1-205ENST00000483847 KMT2BQ9UMN6 2715 aaPredicted RBP12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 CEP250Q9BV73 2442 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 NT5C1B-RDH14C9J2C7 533 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 DDX39AO00148 427 aaKnown RBP12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 HBP1O60381 514 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 GPR32O75388 356 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 DDAH1O94760 285 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 C22orf31O95567 290 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 EOMESO95936 686 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 ATP4AP20648 1035 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 KIF5BP33176 963 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 SLC26A2P50443 739 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 NUCB1Q02818 461 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 COL9A3Q14050 684 aaPredicted RBP12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 ODR4Q5SWX8 454 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 ABHD15Q6UXT9 468 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 FAM43BQ6ZT52 329 aaPredicted RBP12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 RAB11FIP4Q86YS3 637 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 MB21D2Q8IYB1 491 aaPredicted RBP12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 DTWD2Q8NBA8 298 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 RNF169Q8NCN4 708 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 MAP3K14Q99558 947 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 COL1A2P08123 1366 aa12.4□□□□□ -0.42
SMARCC1-205ENST00000483847 BACH1O14867 736 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 HOXA2O43364 376 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 CXCL14O95715 111 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 METAP2P50579 478 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 ZNF484Q5JVG2 852 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 ATAT1Q5SQI0 421 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 TMC5Q6UXY8 1006 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 TMEM173Q86WV6 379 aaPredicted RBP12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 ECHDC2Q86YB7 292 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 ABI1Q8IZP0 508 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 CCDC82Q8N4S0 544 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 SLC22A17Q8WUG5 538 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 LZTS2Q9BRK4 669 aa12.39□□□□□ -0.43
SMARCC1-205ENST00000483847 CYP26B1Q9NR63 512 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms