RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 ZBTB10Q96DT7 871 aa17.43■□□□□ 0.38
RPP40-206ENST00000483546 DHX33Q9H6R0 707 aaKnown RBP17.43■□□□□ 0.38
RPP40-206ENST00000483546 DBR1Q9UK59 544 aaKnown RBP17.43■□□□□ 0.38
RPP40-206ENST00000483546 MED24O75448 989 aa17.42■□□□□ 0.38
RPP40-206ENST00000483546 DGAT1O75907 488 aa17.42■□□□□ 0.38
RPP40-206ENST00000483546 CCT6AP40227 531 aaKnown RBP17.42■□□□□ 0.38
RPP40-206ENST00000483546 POLGP54098 1239 aaPredicted RBP17.42■□□□□ 0.38
RPP40-206ENST00000483546 FBXO47Q5MNV8 452 aa17.42■□□□□ 0.38
RPP40-206ENST00000483546 PLA2G4FQ68DD2 849 aa17.42■□□□□ 0.38
RPP40-206ENST00000483546 TSHZ1Q6ZSZ6 1077 aa17.42■□□□□ 0.38
RPP40-206ENST00000483546 OTOP2Q7RTS6 562 aa17.42■□□□□ 0.38
RPP40-206ENST00000483546 PHOSPHO2Q8TCD6 241 aa17.42■□□□□ 0.38
RPP40-206ENST00000483546 SNX29Q8TEQ0 813 aa17.42■□□□□ 0.38
RPP40-206ENST00000483546 TCP11Q8WWU5 503 aa17.42■□□□□ 0.38
RPP40-206ENST00000483546 ZNF396Q96N95 335 aaPredicted RBP17.42■□□□□ 0.38
RPP40-206ENST00000483546 SUGCTQ9HAC7 445 aa17.42■□□□□ 0.38
RPP40-206ENST00000483546 AKT3Q9Y243 479 aa17.42■□□□□ 0.38
RPP40-206ENST00000483546 SLC4A7Q9Y6M7 1214 aa17.42■□□□□ 0.38
RPP40-206ENST00000483546 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.41■□□□□ 0.38
RPP40-206ENST00000483546 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.41■□□□□ 0.38
RPP40-206ENST00000483546 TMEM150BA6NC51 233 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 VWA3AA6NCI4 1184 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 F13A1P00488 732 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 LONP1P36776 959 aaKnown RBP17.41■□□□□ 0.38
RPP40-206ENST00000483546 RARRES1P49788 294 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 CLCN3P51790 818 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 CRYBB1P53674 252 aaPredicted RBP17.41■□□□□ 0.38
RPP40-206ENST00000483546 NPEPPSP55786 919 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 SMAD3P84022 425 aaKnown RBP17.41■□□□□ 0.38
RPP40-206ENST00000483546 LPIN1Q14693 890 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 IL17AQ16552 155 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 ATL3Q6DD88 541 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 GPR153Q6NV75 609 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 LRRC71Q8N4P6 559 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 DBF4BQ8NFT6 615 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 SLC9A7Q96T83 725 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 IFIH1Q9BYX4 1025 aaKnown RBP17.41■□□□□ 0.38
RPP40-206ENST00000483546 NT5C3AQ9H0P0 336 aa17.41■□□□□ 0.38
RPP40-206ENST00000483546 ZBBXA8MT70 800 aa17.4■□□□□ 0.38
RPP40-206ENST00000483546 GHRP10912 638 aa17.4■□□□□ 0.38
RPP40-206ENST00000483546 KCNJ6P48051 423 aa17.4■□□□□ 0.38
RPP40-206ENST00000483546 TMEM62Q0P6H9 643 aa17.4■□□□□ 0.38
RPP40-206ENST00000483546 EMC2Q15006 297 aa17.4■□□□□ 0.38
RPP40-206ENST00000483546 PTPAQ15257 358 aa17.4■□□□□ 0.38
RPP40-206ENST00000483546 ZNF410Q86VK4 478 aa17.4■□□□□ 0.38
RPP40-206ENST00000483546 SPRYD3Q8NCJ5 442 aa17.4■□□□□ 0.38
RPP40-206ENST00000483546 MTRQ99707 1265 aa17.4■□□□□ 0.38
RPP40-206ENST00000483546 FTHL17Q9BXU8 183 aa17.4■□□□□ 0.38
RPP40-206ENST00000483546 ASAP2O43150 1006 aa17.39■□□□□ 0.37
RPP40-206ENST00000483546 GPR32O75388 356 aa17.39■□□□□ 0.37
RPP40-206ENST00000483546 VTNP04004 478 aa17.39■□□□□ 0.37
RPP40-206ENST00000483546 NASPP49321 788 aaPredicted RBP17.39■□□□□ 0.37
RPP40-206ENST00000483546 GPC3P51654 580 aa17.39■□□□□ 0.37
RPP40-206ENST00000483546 NLRP11P59045 1033 aaKnown RBP17.39■□□□□ 0.37
RPP40-206ENST00000483546 HYIQ5T013 277 aa17.39■□□□□ 0.37
RPP40-206ENST00000483546 POTEGQ6S5H5 508 aa17.39■□□□□ 0.37
RPP40-206ENST00000483546 MCPH1Q8NEM0 835 aa17.39■□□□□ 0.37
RPP40-206ENST00000483546 PIGOQ8TEQ8 1089 aa17.39■□□□□ 0.37
RPP40-206ENST00000483546 PSPC1Q8WXF1 523 aaKnown RBP17.39■□□□□ 0.37
RPP40-206ENST00000483546 USP28Q96RU2 1077 aa17.39■□□□□ 0.37
RPP40-206ENST00000483546 SH2D3AQ9BRG2 576 aa17.39■□□□□ 0.37
RPP40-206ENST00000483546 ATP6V0A4Q9HBG4 840 aa17.39■□□□□ 0.37
RPP40-206ENST00000483546 CXXC1Q9P0U4 656 aaPredicted RBP17.39■□□□□ 0.37
RPP40-206ENST00000483546 SUCLA2Q9P2R7 463 aaPredicted RBP17.39■□□□□ 0.37
RPP40-206ENST00000483546 CLIC4Q9Y696 253 aa17.39■□□□□ 0.37
RPP40-206ENST00000483546 ZBTB39O15060 712 aa17.38■□□□□ 0.37
RPP40-206ENST00000483546 GPR182O15218 404 aa17.38■□□□□ 0.37
RPP40-206ENST00000483546 WDR5P61964 334 aaKnown RBP17.38■□□□□ 0.37
RPP40-206ENST00000483546 PAK2Q13177 524 aa17.38■□□□□ 0.37
RPP40-206ENST00000483546 MKRN4PQ13434 485 aaPredicted RBP17.38■□□□□ 0.37
RPP40-206ENST00000483546 MXD4Q14582 209 aaPredicted RBP17.38■□□□□ 0.37
RPP40-206ENST00000483546 SLC39A14Q15043 492 aa17.38■□□□□ 0.37
RPP40-206ENST00000483546 FAM173BQ6P4H8 233 aa17.38■□□□□ 0.37
RPP40-206ENST00000483546 INO80BQ9C086 356 aaPredicted RBP17.38■□□□□ 0.37
RPP40-206ENST00000483546 ADAMTS10Q9H324 1103 aa17.38■□□□□ 0.37
RPP40-206ENST00000483546 KIAA1024Q9UPX6 916 aa17.38■□□□□ 0.37
RPP40-206ENST00000483546 DNM3Q9UQ16 869 aa17.38■□□□□ 0.37
RPP40-206ENST00000483546 SRPRBQ9Y5M8 271 aaKnown RBP17.38■□□□□ 0.37
RPP40-206ENST00000483546 PTPRSQ13332 1948 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 ARHGEF35A5YM69 484 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 RPS6KA5O75582 802 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 YEATS4O95619 227 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 AMHP03971 560 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 ATP2A2P16615 1042 aaKnown RBP17.37■□□□□ 0.37
RPP40-206ENST00000483546 EIF4BP23588 611 aaKnown RBP17.37■□□□□ 0.37
RPP40-206ENST00000483546 UBA7P41226 1012 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 FXR1P51114 621 aaKnown RBP eCLIP17.37■□□□□ 0.37
RPP40-206ENST00000483546 RAB30Q15771 203 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 KIZQ2M2Z5 673 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 ZNF579Q8NAF0 562 aaKnown RBP17.37■□□□□ 0.37
RPP40-206ENST00000483546 CALML4Q96GE6 196 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 CDK5RAP3Q96JB5 506 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 SCLT1Q96NL6 688 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 MMTAG2Q9BU76 263 aaKnown RBP17.37■□□□□ 0.37
RPP40-206ENST00000483546 GCOM2Q9BZD3 368 aaPredicted RBP17.37■□□□□ 0.37
RPP40-206ENST00000483546 DDX19AQ9NUU7 478 aaKnown RBP17.37■□□□□ 0.37
RPP40-206ENST00000483546 GINS2Q9Y248 185 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 ATP6V1DQ9Y5K8 247 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 COL4A3BPQ9Y5P4 624 aa17.37■□□□□ 0.37
RPP40-206ENST00000483546 GBF1Q92538 1859 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms