RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 NPEPPSP55786 919 aa18.53■□□□□ 0.56
HMGN1-214ENST00000482733 TMEM62Q0P6H9 643 aa18.53■□□□□ 0.56
HMGN1-214ENST00000482733 LPIN1Q14693 890 aa18.53■□□□□ 0.56
HMGN1-214ENST00000482733 XKR9Q5GH70 373 aa18.53■□□□□ 0.56
HMGN1-214ENST00000482733 KRT79Q5XKE5 535 aa18.53■□□□□ 0.56
HMGN1-214ENST00000482733 TSHZ1Q6ZSZ6 1077 aa18.53■□□□□ 0.56
HMGN1-214ENST00000482733 LRRC71Q8N4P6 559 aa18.53■□□□□ 0.56
HMGN1-214ENST00000482733 IFIH1Q9BYX4 1025 aaKnown RBP18.53■□□□□ 0.56
HMGN1-214ENST00000482733 MYH9P35579 1960 aaKnown RBP18.52■□□□□ 0.56
HMGN1-214ENST00000482733 CCT6AP40227 531 aaKnown RBP18.52■□□□□ 0.56
HMGN1-214ENST00000482733 CRYBB1P53674 252 aaPredicted RBP18.52■□□□□ 0.56
HMGN1-214ENST00000482733 SF3A1Q15459 793 aaKnown RBP18.52■□□□□ 0.56
HMGN1-214ENST00000482733 IL17AQ16552 155 aa18.52■□□□□ 0.56
HMGN1-214ENST00000482733 ODR4Q5SWX8 454 aa18.52■□□□□ 0.56
HMGN1-214ENST00000482733 GPR153Q6NV75 609 aa18.52■□□□□ 0.56
HMGN1-214ENST00000482733 SLC9A7Q96T83 725 aa18.52■□□□□ 0.56
HMGN1-214ENST00000482733 SH2D3AQ9BRG2 576 aa18.52■□□□□ 0.56
HMGN1-214ENST00000482733 DHX33Q9H6R0 707 aaKnown RBP18.52■□□□□ 0.56
HMGN1-214ENST00000482733 VTNP04004 478 aa18.51■□□□□ 0.55
HMGN1-214ENST00000482733 SPRYD3Q8NCJ5 442 aa18.51■□□□□ 0.55
HMGN1-214ENST00000482733 SNX29Q8TEQ0 813 aa18.51■□□□□ 0.55
HMGN1-214ENST00000482733 TCP11Q8WWU5 503 aa18.51■□□□□ 0.55
HMGN1-214ENST00000482733 AK8Q96MA6 479 aa18.51■□□□□ 0.55
HMGN1-214ENST00000482733 SUCLA2Q9P2R7 463 aaPredicted RBP18.51■□□□□ 0.55
HMGN1-214ENST00000482733 DBR1Q9UK59 544 aaKnown RBP18.51■□□□□ 0.55
HMGN1-214ENST00000482733 GINS2Q9Y248 185 aa18.51■□□□□ 0.55
HMGN1-214ENST00000482733 LAMA3Q16787 3333 aa18.5■□□□□ 0.55
HMGN1-214ENST00000482733 VWA3AA6NCI4 1184 aa18.5■□□□□ 0.55
HMGN1-214ENST00000482733 SOX1O00570 391 aaPredicted RBP18.5■□□□□ 0.55
HMGN1-214ENST00000482733 ZBTB39O15060 712 aa18.5■□□□□ 0.55
HMGN1-214ENST00000482733 GPR32O75388 356 aa18.5■□□□□ 0.55
HMGN1-214ENST00000482733 DGAT1O75907 488 aa18.5■□□□□ 0.55
HMGN1-214ENST00000482733 ATP2A2P16615 1042 aaKnown RBP18.5■□□□□ 0.55
HMGN1-214ENST00000482733 RARRES1P49788 294 aa18.5■□□□□ 0.55
HMGN1-214ENST00000482733 NLRP11P59045 1033 aaKnown RBP18.5■□□□□ 0.55
HMGN1-214ENST00000482733 WDR5P61964 334 aaKnown RBP18.5■□□□□ 0.55
HMGN1-214ENST00000482733 PAK2Q13177 524 aa18.5■□□□□ 0.55
HMGN1-214ENST00000482733 MKRN4PQ13434 485 aaPredicted RBP18.5■□□□□ 0.55
HMGN1-214ENST00000482733 KIZQ2M2Z5 673 aa18.5■□□□□ 0.55
HMGN1-214ENST00000482733 KCTD17Q8N5Z5 321 aa18.5■□□□□ 0.55
HMGN1-214ENST00000482733 ZNF579Q8NAF0 562 aaKnown RBP18.5■□□□□ 0.55
HMGN1-214ENST00000482733 PIGOQ8TEQ8 1089 aa18.5■□□□□ 0.55
HMGN1-214ENST00000482733 FTHL17Q9BXU8 183 aa18.5■□□□□ 0.55
HMGN1-214ENST00000482733 GPR182O15218 404 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 SLC26A4O43511 780 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 RPS6KA5O75582 802 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 AMHP03971 560 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 ZSCAN22P10073 491 aaPredicted RBP18.49■□□□□ 0.55
HMGN1-214ENST00000482733 GPC3P51654 580 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 EMC2Q15006 297 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 RAB30Q15771 203 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 TCTN1Q2MV58 587 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 POTEGQ6S5H5 508 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 ZNF396Q96N95 335 aaPredicted RBP18.49■□□□□ 0.55
HMGN1-214ENST00000482733 OSMRQ99650 979 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 MTRQ99707 1265 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 OSBPL7Q9BZF2 842 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 ADAMTS10Q9H324 1103 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 AGO3Q9H9G7 860 aaKnown RBP18.49■□□□□ 0.55
HMGN1-214ENST00000482733 ATP6V0A4Q9HBG4 840 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 PADI3Q9ULW8 664 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 CLIC4Q9Y696 253 aa18.49■□□□□ 0.55
HMGN1-214ENST00000482733 MORC2Q9Y6X9 1032 aaPredicted RBP18.49■□□□□ 0.55
HMGN1-214ENST00000482733 ASAP2O43150 1006 aa18.48■□□□□ 0.55
HMGN1-214ENST00000482733 CD52P31358 61 aa18.48■□□□□ 0.55
HMGN1-214ENST00000482733 LONP1P36776 959 aaKnown RBP18.48■□□□□ 0.55
HMGN1-214ENST00000482733 DRP2Q13474 957 aa18.48■□□□□ 0.55
HMGN1-214ENST00000482733 FAM173BQ6P4H8 233 aa18.48■□□□□ 0.55
HMGN1-214ENST00000482733 ZNF410Q86VK4 478 aa18.48■□□□□ 0.55
HMGN1-214ENST00000482733 NLRP7Q8WX94 980 aa18.48■□□□□ 0.55
HMGN1-214ENST00000482733 PSPC1Q8WXF1 523 aaKnown RBP18.48■□□□□ 0.55
HMGN1-214ENST00000482733 LRCH3Q96II8 777 aa18.48■□□□□ 0.55
HMGN1-214ENST00000482733 SCLT1Q96NL6 688 aa18.48■□□□□ 0.55
HMGN1-214ENST00000482733 PPP1R16BQ96T49 567 aa18.48■□□□□ 0.55
HMGN1-214ENST00000482733 GCOM2Q9BZD3 368 aaPredicted RBP18.48■□□□□ 0.55
HMGN1-214ENST00000482733 CDHR5Q9HBB8 845 aa18.48■□□□□ 0.55
HMGN1-214ENST00000482733 MSRAQ9UJ68 235 aa18.48■□□□□ 0.55
HMGN1-214ENST00000482733 KIAA1024Q9UPX6 916 aa18.48■□□□□ 0.55
HMGN1-214ENST00000482733 SCN5AQ14524 2016 aa18.48■□□□□ 0.55
HMGN1-214ENST00000482733 ARHGEF35A5YM69 484 aa18.47■□□□□ 0.55
HMGN1-214ENST00000482733 PP2D1A8MPX8 630 aa18.47■□□□□ 0.55
HMGN1-214ENST00000482733 F13A1P00488 732 aa18.47■□□□□ 0.55
HMGN1-214ENST00000482733 EIF4BP23588 611 aaKnown RBP18.47■□□□□ 0.55
HMGN1-214ENST00000482733 PTPAQ15257 358 aa18.47■□□□□ 0.55
HMGN1-214ENST00000482733 FAM109BQ6ICB4 259 aaPredicted RBP18.47■□□□□ 0.55
HMGN1-214ENST00000482733 RHPN2Q8IUC4 686 aa18.47■□□□□ 0.55
HMGN1-214ENST00000482733 HERC6Q8IVU3 1022 aa18.47■□□□□ 0.55
HMGN1-214ENST00000482733 USP28Q96RU2 1077 aa18.47■□□□□ 0.55
HMGN1-214ENST00000482733 MMTAG2Q9BU76 263 aaKnown RBP18.47■□□□□ 0.55
HMGN1-214ENST00000482733 INO80BQ9C086 356 aaPredicted RBP18.47■□□□□ 0.55
HMGN1-214ENST00000482733 NT5C3AQ9H0P0 336 aa18.47■□□□□ 0.55
HMGN1-214ENST00000482733 DDX19AQ9NUU7 478 aaKnown RBP18.47■□□□□ 0.55
HMGN1-214ENST00000482733 DNM3Q9UQ16 869 aa18.47■□□□□ 0.55
HMGN1-214ENST00000482733 NOC2LQ9Y3T9 749 aaKnown RBP18.47■□□□□ 0.55
HMGN1-214ENST00000482733 COL4A3BPQ9Y5P4 624 aa18.47■□□□□ 0.55
HMGN1-214ENST00000482733 TMEM265A0A087WTH1 108 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 GRXCR1A8MXD5 290 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 DARSP14868 501 aaKnown RBP18.46■□□□□ 0.55
HMGN1-214ENST00000482733 CDC25AP30304 524 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 UBA7P41226 1012 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 499.2 ms