RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 SWAP70Q9UH65 585 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 PNMA2Q9UL42 364 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 SLC12A4Q9UP95 1085 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 CDK5RAP2Q96SN8 1893 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 MYH4Q9Y623 1939 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 EME2A4GXA9 379 aaPredicted RBP15.54■□□□□ 0.08
COL9A2-207ENST00000482722 BHMG1C9JSJ3 638 aaPredicted RBP15.54■□□□□ 0.08
COL9A2-207ENST00000482722 BRD2P25440 801 aaKnown RBP15.54■□□□□ 0.08
COL9A2-207ENST00000482722 DHX9Q08211 1270 aaKnown RBP15.54■□□□□ 0.08
COL9A2-207ENST00000482722 ECM1Q16610 540 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 CRELD2Q6UXH1 353 aaPredicted RBP15.54■□□□□ 0.08
COL9A2-207ENST00000482722 MASTLQ96GX5 879 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 ZNF317Q96PQ6 595 aaPredicted RBP15.54■□□□□ 0.08
COL9A2-207ENST00000482722 MTMR9Q96QG7 549 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 LUC7LQ9NQ29 371 aaKnown RBP15.54■□□□□ 0.08
COL9A2-207ENST00000482722 F8VZ95 297 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 BIRC2Q13490 618 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 SLC18A3Q16572 532 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 FAM133BQ5BKY9 247 aaKnown RBP15.54■□□□□ 0.08
COL9A2-207ENST00000482722 ARMC2Q8NEN0 867 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 RAD54LQ92698 747 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 RAB34Q9BZG1 259 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 TRIM31Q9BZY9 425 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 COA1Q9GZY4 146 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 KIF9Q9HAQ2 790 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 PANK4Q9NVE7 773 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 AMACRQ9UHK6 382 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 TRPC6Q9Y210 931 aa15.54■□□□□ 0.08
COL9A2-207ENST00000482722 MAST2Q6P0Q8 1798 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 KIF4AO95239 1232 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 FGFR1OPO95684 399 aaKnown RBP15.53■□□□□ 0.08
COL9A2-207ENST00000482722 ACTN1P12814 892 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 ITGA4P13612 1032 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 ALDH1B1P30837 517 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 PDE6BP35913 854 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 INHBEP58166 350 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 APOBEC3HQ6NTF7 200 aaKnown RBP15.53■□□□□ 0.08
COL9A2-207ENST00000482722 NAV1Q8NEY1 1877 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 AGAP11Q8TF27 550 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 TLCD1Q96CP7 247 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 EDEM3Q9BZQ6 932 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 BATF3Q9NR55 127 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 CEP72Q9P209 647 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 COL4A3BPQ9Y5P4 624 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 NPHP3-ACAD11A0A0J9YXS1 232 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 PEX19P40855 299 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 LRRC63Q05C16 580 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 COBLL1Q53SF7 1204 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 KCTD1Q719H9 257 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 ANKS4BQ8N8V4 417 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 TSG101Q99816 390 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 CNOT10Q9H9A5 744 aaKnown RBP15.53■□□□□ 0.08
COL9A2-207ENST00000482722 STK17AQ9UEE5 414 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 SLX4Q8IY92 1834 aa15.53■□□□□ 0.08
COL9A2-207ENST00000482722 H0YIN7 160 aa15.52■□□□□ 0.08
COL9A2-207ENST00000482722 CAND2O75155 1236 aa15.52■□□□□ 0.08
COL9A2-207ENST00000482722 CHN1P15882 459 aa15.52■□□□□ 0.08
COL9A2-207ENST00000482722 TAL1P17542 331 aaPredicted RBP15.52■□□□□ 0.08
COL9A2-207ENST00000482722 RIPK1Q13546 671 aa15.52■□□□□ 0.08
COL9A2-207ENST00000482722 ZNF570Q96NI8 536 aa15.52■□□□□ 0.08
COL9A2-207ENST00000482722 SPAG5Q96R06 1193 aa15.52■□□□□ 0.08
COL9A2-207ENST00000482722 TMX4Q9H1E5 349 aaPredicted RBP15.52■□□□□ 0.08
COL9A2-207ENST00000482722 DPH5Q9H2P9 285 aa15.52■□□□□ 0.08
COL9A2-207ENST00000482722 MTMR4Q9NYA4 1195 aa15.52■□□□□ 0.08
COL9A2-207ENST00000482722 DDX25Q9UHL0 483 aaKnown RBP15.52■□□□□ 0.08
COL9A2-207ENST00000482722 NOC2LQ9Y3T9 749 aaKnown RBP15.52■□□□□ 0.08
COL9A2-207ENST00000482722 GSTA1P08263 222 aa15.52■□□□□ 0.07
COL9A2-207ENST00000482722 MMEP08473 750 aa15.52■□□□□ 0.07
COL9A2-207ENST00000482722 SNAP25P60880 206 aa15.52■□□□□ 0.07
COL9A2-207ENST00000482722 SARNPP82979 210 aaKnown RBP15.52■□□□□ 0.07
COL9A2-207ENST00000482722 MYOCDQ8IZQ8 938 aa15.52■□□□□ 0.07
COL9A2-207ENST00000482722 ACTRT1Q8TDG2 376 aa15.52■□□□□ 0.07
COL9A2-207ENST00000482722 L3MBTL3Q96JM7 780 aaPredicted RBP15.52■□□□□ 0.07
COL9A2-207ENST00000482722 CELF4Q9BZC1 486 aaKnown RBP15.52■□□□□ 0.07
COL9A2-207ENST00000482722 RIOX1Q9H6W3 641 aa15.52■□□□□ 0.07
COL9A2-207ENST00000482722 AGAP1Q9UPQ3 857 aa15.52■□□□□ 0.07
COL9A2-207ENST00000482722 ABCB11O95342 1321 aa15.52■□□□□ 0.07
COL9A2-207ENST00000482722 SCN9AQ15858 1988 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 E9PMD0 336 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 TTI1O43156 1089 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 EDIL3O43854 480 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 PLCG2P16885 1265 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 USP11P51784 963 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 CDCA2Q69YH5 1023 aaPredicted RBP15.51■□□□□ 0.07
COL9A2-207ENST00000482722 ADGRF4Q8IZF3 695 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 CENPTQ96BT3 561 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 SELENOSQ9BQE4 189 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.51■□□□□ 0.07
COL9A2-207ENST00000482722 GAKO14976 1311 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 PVALEFA0A1B0GWK0 134 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 DDTLA6NHG4 134 aaPredicted RBP15.51■□□□□ 0.07
COL9A2-207ENST00000482722 PGRMC1O00264 195 aaKnown RBP15.51■□□□□ 0.07
COL9A2-207ENST00000482722 KRIT1O00522 736 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 CES2O00748 559 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 FXR2P51116 673 aaKnown RBP eCLIP15.51■□□□□ 0.07
COL9A2-207ENST00000482722 FKBP3Q00688 224 aaKnown RBP15.51■□□□□ 0.07
COL9A2-207ENST00000482722 PTK2Q05397 1052 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 LRRC34Q8IZ02 419 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 RNF217Q8TC41 542 aa15.51■□□□□ 0.07
COL9A2-207ENST00000482722 SYN2Q92777 582 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms