RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 LMNB1P20700 586 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 NPEPPSP55786 919 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 GABPAQ06546 454 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 SNX1Q13596 522 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 MTERF2Q49AM1 385 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 PAPD7Q5XG87 772 aaKnown RBP9.92□□□□□ -0.82
CALD1-220ENST00000482470 FRMD5Q7Z6J6 570 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 MSANTD4Q8NCY6 345 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 PLVAPQ9BX97 442 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 TMOD4Q9NZQ9 345 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 GINS2Q9Y248 185 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 SIK3Q9Y2K2 1263 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 EMSYQ7Z589 1322 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 TMEM150BA6NC51 233 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 M0R2N6 131 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 MEIS2O14770 477 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 SSTR3P32745 418 aaPredicted RBP9.92□□□□□ -0.82
CALD1-220ENST00000482470 COPB2P35606 906 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 MEA1Q16626 185 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 TMEM119Q4V9L6 283 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 DACT2Q5SW24 774 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 LMBRD2Q68DH5 695 aaPredicted RBP9.92□□□□□ -0.82
CALD1-220ENST00000482470 LRRC55Q6ZSA7 311 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 ACCSQ96QU6 501 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 IMPG2Q9BZV3 1241 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 KCNK9Q9NPC2 374 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 KMT5AQ9NQR1 393 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 HERC5Q9UII4 1024 aaKnown RBP9.92□□□□□ -0.82
CALD1-220ENST00000482470 SERPINA10Q9UK55 444 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 PKD1L3Q7Z443 1732 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 A0A1W2PRG0 241 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 ZNF263O14978 683 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 LIG3P49916 1009 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 LIG4P49917 911 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 GALCP54803 685 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 DHX9Q08211 1270 aaKnown RBP9.92□□□□□ -0.82
CALD1-220ENST00000482470 KCNMA1Q12791 1236 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 STRN3Q13033 797 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 KLHDC7AQ5VTJ3 777 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 PLA2G4FQ68DD2 849 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 C15orf52Q6ZUT6 534 aaKnown RBP9.92□□□□□ -0.82
CALD1-220ENST00000482470 FAM160B2Q86V87 743 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 TRIM59Q8IWR1 403 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 KIFAP3Q92845 792 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 ZNF668Q96K58 619 aaPredicted RBP9.92□□□□□ -0.82
CALD1-220ENST00000482470 NAP1L3Q99457 506 aaPredicted RBP9.92□□□□□ -0.82
CALD1-220ENST00000482470 KIFC3Q9BVG8 833 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 SYNCQ9H7C4 482 aa9.92□□□□□ -0.82
CALD1-220ENST00000482470 DNAJC17Q9NVM6 304 aaKnown RBP9.92□□□□□ -0.82
CALD1-220ENST00000482470 MTRF1LQ9UGC7 380 aaKnown RBP9.92□□□□□ -0.82
CALD1-220ENST00000482470 POLD1P28340 1107 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 SLCO1A2P46721 670 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 TNFAIP1Q13829 316 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 SEPT7Q16181 437 aaKnown RBP9.91□□□□□ -0.82
CALD1-220ENST00000482470 CIAPIN1Q6FI81 312 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 RNF207Q6ZRF8 634 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 SEPT14Q6ZU15 432 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 ANKRD35Q8N283 1001 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 ARFGAP2Q8N6H7 521 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 ZNF653Q96CK0 615 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 GPRC5CQ9NQ84 441 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 HPCAL4Q9UM19 191 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 CRYBG1Q9Y4K1 1723 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 NUP98P52948 1817 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 PON1P27169 355 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 EDRF1Q3B7T1 1238 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 FIGNQ5HY92 759 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 TAB3Q8N5C8 712 aaPredicted RBP9.91□□□□□ -0.82
CALD1-220ENST00000482470 MGARPQ8TDB4 240 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 GLIS2Q9BZE0 524 aaPredicted RBP9.91□□□□□ -0.82
CALD1-220ENST00000482470 EDEM3Q9BZQ6 932 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 INTS2Q9H0H0 1204 aaKnown RBP9.91□□□□□ -0.82
CALD1-220ENST00000482470 VCPKMTQ9H867 229 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 SNX24Q9Y343 169 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 RRP15Q9Y3B9 282 aaKnown RBP9.91□□□□□ -0.82
CALD1-220ENST00000482470 SIPA1L3O60292 1781 aaPredicted RBP9.91□□□□□ -0.82
CALD1-220ENST00000482470 BCL9LQ86UU0 1499 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 USP54Q70EL1 1684 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 GOLGA8KD6RF30 607 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 TRIM66O15016 1216 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 BUB1BO60566 1050 aaPredicted RBP9.91□□□□□ -0.82
CALD1-220ENST00000482470 ENTPD3O75355 529 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 TRIP13Q15645 432 aaPredicted RBP9.91□□□□□ -0.82
CALD1-220ENST00000482470 CYFIP1Q7L576 1253 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 OTUD6AQ7L8S5 288 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 ZNF571Q7Z3V5 609 aaPredicted RBP9.91□□□□□ -0.82
CALD1-220ENST00000482470 PRPF38AQ8NAV1 312 aaKnown RBP9.91□□□□□ -0.82
CALD1-220ENST00000482470 OR2W6PQ8NHA6 318 aa9.91□□□□□ -0.82
CALD1-220ENST00000482470 RGL2O15211 777 aa9.9□□□□□ -0.82
CALD1-220ENST00000482470 DAPK3O43293 454 aa9.9□□□□□ -0.82
CALD1-220ENST00000482470 KIF4AO95239 1232 aa9.9□□□□□ -0.82
CALD1-220ENST00000482470 FTLP02792 175 aaPredicted RBP9.9□□□□□ -0.82
CALD1-220ENST00000482470 MYBL2P10244 700 aa9.9□□□□□ -0.82
CALD1-220ENST00000482470 SREBF1P36956 1147 aa9.9□□□□□ -0.82
CALD1-220ENST00000482470 QARSP47897 775 aaKnown RBP9.9□□□□□ -0.82
CALD1-220ENST00000482470 FMO5P49326 533 aa9.9□□□□□ -0.82
CALD1-220ENST00000482470 NBPF9Q3BBW0 867 aa9.9□□□□□ -0.82
CALD1-220ENST00000482470 EMBQ6PCB8 327 aa9.9□□□□□ -0.82
CALD1-220ENST00000482470 XXYLT1Q8NBI6 393 aa9.9□□□□□ -0.82
CALD1-220ENST00000482470 HNRNPLLQ8WVV9 542 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms