RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 CDC42EP1Q00587 391 aa22.35■■□□□ 1.17
MSH5-215ENST00000482280 UGCGQ16739 394 aa22.35■■□□□ 1.17
MSH5-215ENST00000482280 BANK1Q8NDB2 785 aa22.35■■□□□ 1.17
MSH5-215ENST00000482280 JPH2Q9BR39 696 aaPredicted RBP22.35■■□□□ 1.17
MSH5-215ENST00000482280 UPF2Q9HAU5 1272 aaKnown RBP22.35■■□□□ 1.17
MSH5-215ENST00000482280 ERVK-5Q9HDB9 667 aa22.35■■□□□ 1.17
MSH5-215ENST00000482280 ST3GAL5Q9UNP4 418 aa22.35■■□□□ 1.17
MSH5-215ENST00000482280 H3BNC9 293 aa22.34■■□□□ 1.17
MSH5-215ENST00000482280 DGKIO75912 1065 aa22.34■■□□□ 1.17
MSH5-215ENST00000482280 MMP1P03956 469 aa22.34■■□□□ 1.17
MSH5-215ENST00000482280 RB1P06400 928 aa22.34■■□□□ 1.17
MSH5-215ENST00000482280 FDPSP14324 419 aaKnown RBP22.34■■□□□ 1.17
MSH5-215ENST00000482280 ZSCAN20P17040 1043 aaPredicted RBP22.34■■□□□ 1.17
MSH5-215ENST00000482280 SARSP49591 514 aaKnown RBP22.34■■□□□ 1.17
MSH5-215ENST00000482280 PPP2R5CQ13362 524 aa22.34■■□□□ 1.17
MSH5-215ENST00000482280 TIGD5Q53EQ6 642 aa22.34■■□□□ 1.17
MSH5-215ENST00000482280 EXOC8Q8IYI6 725 aa22.34■■□□□ 1.17
MSH5-215ENST00000482280 NLRP7Q8WX94 980 aa22.34■■□□□ 1.17
MSH5-215ENST00000482280 MRPL38Q96DV4 380 aaKnown RBP22.34■■□□□ 1.17
MSH5-215ENST00000482280 ADAM2Q99965 735 aa22.34■■□□□ 1.17
MSH5-215ENST00000482280 MYH9P35579 1960 aaKnown RBP22.33■■□□□ 1.17
MSH5-215ENST00000482280 QARSP47897 775 aaKnown RBP22.33■■□□□ 1.17
MSH5-215ENST00000482280 NR5A1Q13285 461 aa22.33■■□□□ 1.17
MSH5-215ENST00000482280 SLC24A5Q71RS6 500 aa22.33■■□□□ 1.17
MSH5-215ENST00000482280 DIS3L2Q8IYB7 885 aaKnown RBP22.33■■□□□ 1.17
MSH5-215ENST00000482280 CMTR2Q8IYT2 770 aaKnown RBP22.33■■□□□ 1.17
MSH5-215ENST00000482280 LINC01599Q8WXQ3 324 aa22.33■■□□□ 1.17
MSH5-215ENST00000482280 ZSCAN31Q96LW9 406 aaPredicted RBP22.33■■□□□ 1.17
MSH5-215ENST00000482280 NIFKQ9BYG3 293 aaKnown RBP22.33■■□□□ 1.17
MSH5-215ENST00000482280 CDHR5Q9HBB8 845 aa22.33■■□□□ 1.17
MSH5-215ENST00000482280 KCNMB3Q9NPA1 279 aa22.33■■□□□ 1.17
MSH5-215ENST00000482280 COL4A6Q14031 1691 aa22.33■■□□□ 1.16
MSH5-215ENST00000482280 SIP14410 1827 aa22.32■■□□□ 1.16
MSH5-215ENST00000482280 JAK2O60674 1132 aa22.32■■□□□ 1.16
MSH5-215ENST00000482280 GPR32O75388 356 aa22.32■■□□□ 1.16
MSH5-215ENST00000482280 P4HBP07237 508 aaKnown RBP22.32■■□□□ 1.16
MSH5-215ENST00000482280 EIF4BP23588 611 aaKnown RBP22.32■■□□□ 1.16
MSH5-215ENST00000482280 BMPR1AP36894 532 aa22.32■■□□□ 1.16
MSH5-215ENST00000482280 GNL2Q13823 731 aaKnown RBP22.32■■□□□ 1.16
MSH5-215ENST00000482280 PAN2Q504Q3 1202 aaKnown RBP22.32■■□□□ 1.16
MSH5-215ENST00000482280 SPOUT1Q5T280 376 aaKnown RBP22.32■■□□□ 1.16
MSH5-215ENST00000482280 NCAPH2Q6IBW4 605 aa22.32■■□□□ 1.16
MSH5-215ENST00000482280 FAM184AQ8NB25 1140 aa22.32■■□□□ 1.16
MSH5-215ENST00000482280 TMEM40Q8WWA1 233 aa22.32■■□□□ 1.16
MSH5-215ENST00000482280 TMX1Q9H3N1 280 aa22.32■■□□□ 1.16
MSH5-215ENST00000482280 COL4A4P53420 1690 aaPredicted RBP22.32■■□□□ 1.16
MSH5-215ENST00000482280 B3GNT9Q6UX72 402 aa22.31■■□□□ 1.16
MSH5-215ENST00000482280 OTUD6AQ7L8S5 288 aa22.31■■□□□ 1.16
MSH5-215ENST00000482280 RTN4RL1Q86UN2 441 aaPredicted RBP22.31■■□□□ 1.16
MSH5-215ENST00000482280 POTEDQ86YR6 584 aa22.31■■□□□ 1.16
MSH5-215ENST00000482280 CCDC83Q8IWF9 413 aa22.31■■□□□ 1.16
MSH5-215ENST00000482280 SLC7A3Q8WY07 619 aa22.31■■□□□ 1.16
MSH5-215ENST00000482280 ZNF689Q96CS4 500 aaPredicted RBP22.31■■□□□ 1.16
MSH5-215ENST00000482280 LLPHQ9BRT6 129 aaKnown RBP22.31■■□□□ 1.16
MSH5-215ENST00000482280 PLVAPQ9BX97 442 aa22.31■■□□□ 1.16
MSH5-215ENST00000482280 GCOM2Q9BZD3 368 aaPredicted RBP22.31■■□□□ 1.16
MSH5-215ENST00000482280 SH2B1Q9NRF2 756 aaPredicted RBP22.31■■□□□ 1.16
MSH5-215ENST00000482280 RGS18Q9NS28 235 aa22.31■■□□□ 1.16
MSH5-215ENST00000482280 BTBD18B2RXH4 712 aa22.3■■□□□ 1.16
MSH5-215ENST00000482280 HMGN5P82970 282 aaKnown RBP22.3■■□□□ 1.16
MSH5-215ENST00000482280 TFF2Q03403 129 aa22.3■■□□□ 1.16
MSH5-215ENST00000482280 CALCRLQ16602 461 aa22.3■■□□□ 1.16
MSH5-215ENST00000482280 FAM228AQ86W67 206 aa22.3■■□□□ 1.16
MSH5-215ENST00000482280 ADAMTS19Q8TE59 1207 aa22.3■■□□□ 1.16
MSH5-215ENST00000482280 C8orf76Q96K31 380 aa22.3■■□□□ 1.16
MSH5-215ENST00000482280 CCDC43Q96MW1 224 aaKnown RBP22.3■■□□□ 1.16
MSH5-215ENST00000482280 INO80BQ9C086 356 aaPredicted RBP22.3■■□□□ 1.16
MSH5-215ENST00000482280 LMAN2LQ9H0V9 348 aa22.3■■□□□ 1.16
MSH5-215ENST00000482280 ATP6V0A4Q9HBG4 840 aa22.3■■□□□ 1.16
MSH5-215ENST00000482280 AAASQ9NRG9 546 aa22.3■■□□□ 1.16
MSH5-215ENST00000482280 VAV3Q9UKW4 847 aa22.3■■□□□ 1.16
MSH5-215ENST00000482280 PCDHA12Q9UN75 941 aa22.3■■□□□ 1.16
MSH5-215ENST00000482280 C5orf67F2Z3F1 127 aa22.29■■□□□ 1.16
MSH5-215ENST00000482280 HOXA2O43364 376 aa22.29■■□□□ 1.16
MSH5-215ENST00000482280 NEMFO60524 1076 aa22.29■■□□□ 1.16
MSH5-215ENST00000482280 GPC3P51654 580 aa22.29■■□□□ 1.16
MSH5-215ENST00000482280 POLGP54098 1239 aaPredicted RBP22.29■■□□□ 1.16
MSH5-215ENST00000482280 EPHA7Q15375 998 aa22.29■■□□□ 1.16
MSH5-215ENST00000482280 TARBP2Q15633 366 aaKnown RBP22.29■■□□□ 1.16
MSH5-215ENST00000482280 ABI1Q8IZP0 508 aa22.29■■□□□ 1.16
MSH5-215ENST00000482280 CLP1Q92989 425 aaKnown RBP22.29■■□□□ 1.16
MSH5-215ENST00000482280 CEP170P1Q96L14 293 aa22.29■■□□□ 1.16
MSH5-215ENST00000482280 PPME1Q9Y570 386 aa22.29■■□□□ 1.16
MSH5-215ENST00000482280 EML1O00423 815 aa22.28■■□□□ 1.16
MSH5-215ENST00000482280 SFPQP23246 707 aaKnown RBP eCLIP22.28■■□□□ 1.16
MSH5-215ENST00000482280 C8orf34Q49A92 452 aa22.28■■□□□ 1.16
MSH5-215ENST00000482280 EARS2Q5JPH6 523 aaKnown RBP22.28■■□□□ 1.16
MSH5-215ENST00000482280 EP400NLQ6ZTU2 488 aa22.28■■□□□ 1.16
MSH5-215ENST00000482280 LINC01465Q8N7H1 131 aa22.28■■□□□ 1.16
MSH5-215ENST00000482280 PPP2R3CQ969Q6 453 aa22.28■■□□□ 1.16
MSH5-215ENST00000482280 ZNF668Q96K58 619 aaPredicted RBP22.28■■□□□ 1.16
MSH5-215ENST00000482280 UHRF1Q96T88 793 aaPredicted RBP22.28■■□□□ 1.16
MSH5-215ENST00000482280 SH2D3AQ9BRG2 576 aa22.28■■□□□ 1.16
MSH5-215ENST00000482280 LXNQ9BS40 222 aa22.28■■□□□ 1.16
MSH5-215ENST00000482280 ADAMTS10Q9H324 1103 aa22.28■■□□□ 1.16
MSH5-215ENST00000482280 NSUN3Q9H649 340 aaKnown RBP22.28■■□□□ 1.16
MSH5-215ENST00000482280 ZSWIM4Q9H7M6 989 aa22.28■■□□□ 1.16
MSH5-215ENST00000482280 RC3H2Q9HBD1 1191 aaKnown RBP22.28■■□□□ 1.16
MSH5-215ENST00000482280 CYP26B1Q9NR63 512 aa22.28■■□□□ 1.16
MSH5-215ENST00000482280 TMEM161AQ9NX61 479 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms