RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 DDX3XO00571 662 aaKnown RBP eCLIP16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 FLOT1O75955 427 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 SLCO1A2P46721 670 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 THEMIS2Q5TEJ8 643 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 ZC3H3Q8IXZ2 948 aaKnown RBP16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 SYCE1Q8N0S2 351 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 TBC1D16Q8TBP0 767 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 DYNLL2Q96FJ2 89 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 FAM167BQ9BTA0 163 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 C6orf50Q9HD87 102 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 OSGEPQ9NPF4 335 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 GRHL1Q9NZI5 618 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 CNOT7Q9UIV1 285 aaKnown RBP16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 PPP1R9AQ9ULJ8 1098 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 STK38LQ9Y2H1 464 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 ZNF335Q9H4Z2 1342 aaPredicted RBP16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 EVI5O60447 810 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 UPP2O95045 317 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 TDP2O95551 362 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 ATP2A2P16615 1042 aaKnown RBP16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 NPEPPSP55786 919 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 PLS1Q14651 629 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 CCDC38Q502W7 563 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 KIAA1755Q5JYT7 1200 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 AP1ARQ63HQ0 302 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 FITM2Q8N6M3 262 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 SCFD1Q8WVM8 642 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 NLRP3Q96P20 1036 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 TMEM109Q9BVC6 243 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 MCM9Q9NXL9 1143 aa16.85■□□□□ 0.29
CNKSR1-207ENST00000482227 KLRF2D3W0D1 207 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 GNA11P29992 359 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 ADAM9Q13443 819 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 AUHQ13825 339 aaKnown RBP16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 LRRC14Q15048 493 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 JAMLQ86YT9 394 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 OLIG1Q8TAK6 271 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 FAM84BQ96KN1 310 aaPredicted RBP16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 DBR1Q9UK59 544 aaKnown RBP16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 TCP11X1B4DZS4 312 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 PON1P27169 355 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 EPS15P42566 896 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 ORC2Q13416 577 aaPredicted RBP16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 PDIA5Q14554 519 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 MAEAQ7L5Y9 396 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 EXOC3L1Q86VI1 746 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 TMEM47Q9BQJ4 181 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 AMFRQ9UKV5 643 aa16.84■□□□□ 0.29
CNKSR1-207ENST00000482227 MYH4Q9Y623 1939 aa16.83■□□□□ 0.29
CNKSR1-207ENST00000482227 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.83■□□□□ 0.29
CNKSR1-207ENST00000482227 ATP8B3O60423 1300 aa16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 COL5A2P05997 1499 aaPredicted RBP16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 EIF4E1BA6NMX2 242 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 GJB6O95452 261 aa16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 DRG2P55039 364 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 KRT79Q5XKE5 535 aa16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 GBP7Q8N8V2 638 aaPredicted RBP16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 MOV10L1Q9BXT6 1211 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 LRRC27Q9C0I9 530 aa16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 ZFATQ9P243 1243 aa16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 FAM187AA6NFU0 413 aa16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 AP1G2O75843 785 aa16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 GALCP54803 685 aa16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 MAPK7Q13164 816 aa16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 PRPF4BQ13523 1007 aaKnown RBP16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 SEPT2Q15019 361 aa16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 SPZ1Q9BXG8 430 aa16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 HDAC9Q9UKV0 1011 aa16.83■□□□□ 0.28
CNKSR1-207ENST00000482227 SUN1O94901 812 aa16.82■□□□□ 0.28
CNKSR1-207ENST00000482227 FGFR4P22455 802 aa16.82■□□□□ 0.28
CNKSR1-207ENST00000482227 TMEM266Q2M3C6 531 aa16.82■□□□□ 0.28
CNKSR1-207ENST00000482227 C12orf60Q5U649 245 aa16.82■□□□□ 0.28
CNKSR1-207ENST00000482227 BTNL9Q6UXG8 535 aa16.82■□□□□ 0.28
CNKSR1-207ENST00000482227 REXO1Q8N1G1 1221 aaKnown RBP16.82■□□□□ 0.28
CNKSR1-207ENST00000482227 ANKLE1Q8NAG6 615 aa16.82■□□□□ 0.28
CNKSR1-207ENST00000482227 KCNV2Q8TDN2 545 aa16.82■□□□□ 0.28
CNKSR1-207ENST00000482227 NAF1Q96HR8 494 aaKnown RBP16.82■□□□□ 0.28
CNKSR1-207ENST00000482227 ETAA1Q9NY74 926 aa16.82■□□□□ 0.28
CNKSR1-207ENST00000482227 INTUQ9ULD6 942 aa16.82■□□□□ 0.28
CNKSR1-207ENST00000482227 NUP98P52948 1817 aa16.82■□□□□ 0.28
CNKSR1-207ENST00000482227 SNUPNO95149 360 aaKnown RBP16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 FESP07332 822 aa16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 CREB1P16220 341 aa16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 PTGIRP43119 386 aa16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 JAM2P57087 298 aa16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 CACNB1Q02641 598 aaPredicted RBP16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 PPATQ06203 517 aa16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 ZNF211Q13398 564 aaPredicted RBP16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 BARGINQ6ZT62 677 aa16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 U2AF1L4Q8WU68 220 aaKnown RBP16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 UTP4Q969X6 686 aaKnown RBP16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 RMDN2Q96LZ7 410 aa16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 CCDC113Q9H0I3 377 aa16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 SIX2Q9NPC8 291 aa16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 NKX1-2Q9UD57 310 aaPredicted RBP16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 PRKAG3Q9UGI9 489 aa16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 STX8Q9UNK0 236 aa16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 IGSF9BQ9UPX0 1349 aa16.81■□□□□ 0.28
CNKSR1-207ENST00000482227 NPHP3-ACAD11A0A0J9YXS1 232 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms