RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 NAALADL2Q58DX5 795 aa10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 ODR4Q5SWX8 454 aa10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 SLC24A5Q71RS6 500 aa10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 CKAP2LQ8IYA6 745 aa10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 BANK1Q8NDB2 785 aa10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 P2RX5Q93086 422 aa10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 FAM20AQ96MK3 541 aa10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 UHRF1Q96T88 793 aaPredicted RBP10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 TEKT3Q9BXF9 490 aa10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 LMAN2LQ9H0V9 348 aa10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 C1orf112Q9NSG2 853 aa10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 GJB4Q9NTQ9 266 aa10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 VAV3Q9UKW4 847 aa10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 COL4A4P53420 1690 aaPredicted RBP10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 WDR81Q562E7 1941 aa10.97□□□□□ -0.65
TMEM39A-207ENST00000482162 LOXHD1Q8IVV2 1947 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 TBX3O15119 743 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 GRM6O15303 877 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 SLC37A4O43826 429 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 SEC24BO95487 1268 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 STAG3L1P0CL83 205 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 GCFC2P16383 781 aaKnown RBP10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 EIF4BP23588 611 aaKnown RBP10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 PRKCEQ02156 737 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 PPP2R5CQ13362 524 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 BTG3Q14201 252 aaPredicted RBP10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 SKIV2LQ15477 1246 aaKnown RBP10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 INF2Q27J81 1249 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 KIZQ2M2Z5 673 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 TMEM266Q2M3C6 531 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 TIGD5Q53EQ6 642 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 XKR3Q5GH77 459 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 EFCAB12Q6NXP0 572 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 FAM228AQ86W67 206 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 NEK9Q8TD19 979 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 OXER1Q8TDS5 423 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 HAS1Q92839 578 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 ADAM2Q99965 735 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 C11orf84Q9BUA3 381 aaPredicted RBP10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 ELAC1Q9H777 363 aaKnown RBP10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 UBE2ZQ9H832 354 aaPredicted RBP10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 ORC3Q9UBD5 711 aaPredicted RBP10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 DDX25Q9UHL0 483 aaKnown RBP10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 TCEAL9Q9UHQ7 104 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 PLAGL2Q9UPG8 496 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 SAMM50Q9Y512 469 aa10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 MRPL42Q9Y6G3 142 aaKnown RBP10.96□□□□□ -0.65
TMEM39A-207ENST00000482162 MUC3AQ02505 3323 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 EML1O00423 815 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 VTNP04004 478 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 TMOD1P28289 359 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 GPC3P51654 580 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 CLCN3P51790 818 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 NLRP11P59045 1033 aaKnown RBP10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 CDC42EP1Q00587 391 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 NFX1Q12986 1120 aaKnown RBP10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 TCEAL5Q5H9L2 206 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 EARS2Q5JPH6 523 aaKnown RBP10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 MIER3Q7Z3K6 550 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 NEK8Q86SG6 692 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 METTL13Q8N6R0 699 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 SPPL3Q8TCT6 385 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 GTF3C6Q969F1 213 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 NECAB3Q96P71 396 aaPredicted RBP10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 OSMRQ99650 979 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 NSUN3Q9H649 340 aaKnown RBP10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 TCF20Q9UGU0 1960 aaKnown RBP10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 RALGAPA2Q2PPJ7 1873 aa10.95□□□□□ -0.66
TMEM39A-207ENST00000482162 NCK2O43639 380 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 LARGE1O95461 756 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 MMP1P03956 469 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 DARSP14868 501 aaKnown RBP10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 XBP1P17861 261 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 CTNNB1P35222 781 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 LTBRP36941 435 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 PSMC5P62195 406 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 CACNB1Q02641 598 aaPredicted RBP10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 SPIRE1Q08AE8 756 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 ST3GAL1Q11201 340 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 DRP2Q13474 957 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 ANO5Q75V66 913 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 NECAB1Q8N987 351 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 NSUN7Q8NE18 718 aaKnown RBP10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 WASF1Q92558 559 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 PABPC5Q96DU9 382 aaKnown RBP10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 NAP1L4Q99733 375 aaKnown RBP10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 TRAIPQ9BWF2 469 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 RNF19AQ9NV58 838 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 TMEM161AQ9NX61 479 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 RAPGEFL1Q9UHV5 662 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 GINS2Q9Y248 185 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 PCDHB7Q9Y5E2 793 aa10.94□□□□□ -0.66
TMEM39A-207ENST00000482162 CCDC194A0A1B0GVG4 234 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 GRXCR2A6NFK2 248 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 CHMP2AO43633 222 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 DTNBO60941 627 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 MAFO75444 373 aaPredicted RBP10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 ITGB1P05556 798 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 DNAJB1P25685 340 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms