RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 SHCBP1Q8NEM2 672 aa17.33■□□□□ 0.36
RXRA-202ENST00000481739 DNERQ8NFT8 737 aa17.33■□□□□ 0.36
RXRA-202ENST00000481739 CCDC102AQ96A19 550 aa17.33■□□□□ 0.36
RXRA-202ENST00000481739 EIF3CQ99613 913 aaKnown RBP17.33■□□□□ 0.36
RXRA-202ENST00000481739 MKNK1Q9BUB5 465 aa17.33■□□□□ 0.36
RXRA-202ENST00000481739 PORCNQ9H237 461 aa17.33■□□□□ 0.36
RXRA-202ENST00000481739 MMRN2Q9H8L6 949 aa17.33■□□□□ 0.36
RXRA-202ENST00000481739 EFCC1Q9HA90 598 aa17.33■□□□□ 0.36
RXRA-202ENST00000481739 CEP72Q9P209 647 aa17.33■□□□□ 0.36
RXRA-202ENST00000481739 ARMCX3Q9UH62 379 aaPredicted RBP17.33■□□□□ 0.36
RXRA-202ENST00000481739 ZNF215Q9UL58 517 aaPredicted RBP17.33■□□□□ 0.36
RXRA-202ENST00000481739 PCDHB13Q9Y5F0 798 aa17.33■□□□□ 0.36
RXRA-202ENST00000481739 LCTP09848 1927 aa17.32■□□□□ 0.36
RXRA-202ENST00000481739 RSPH10B2B2RC85 870 aa17.32■□□□□ 0.36
RXRA-202ENST00000481739 RRP9O43818 475 aaKnown RBP17.32■□□□□ 0.36
RXRA-202ENST00000481739 DKC1O60832 514 aaKnown RBP eCLIP17.32■□□□□ 0.368e-7■■■■■ 43.9
RXRA-202ENST00000481739 PGK2P07205 417 aa17.32■□□□□ 0.36
RXRA-202ENST00000481739 RSPH10BP0C881 870 aa17.32■□□□□ 0.36
RXRA-202ENST00000481739 MYBP10242 640 aa17.32■□□□□ 0.36
RXRA-202ENST00000481739 EPB41P11171 864 aaKnown RBP17.32■□□□□ 0.36
RXRA-202ENST00000481739 ITGB3BPQ13352 177 aaPredicted RBP17.32■□□□□ 0.36
RXRA-202ENST00000481739 C4orf19Q8IY42 314 aa17.32■□□□□ 0.36
RXRA-202ENST00000481739 TXLNBQ8N3L3 684 aa17.32■□□□□ 0.36
RXRA-202ENST00000481739 SLC17A8Q8NDX2 589 aa17.32■□□□□ 0.36
RXRA-202ENST00000481739 CHP1Q99653 195 aa17.32■□□□□ 0.36
RXRA-202ENST00000481739 SENP7Q9BQF6 1050 aa17.32■□□□□ 0.36
RXRA-202ENST00000481739 LZTFL1Q9NQ48 299 aa17.32■□□□□ 0.36
RXRA-202ENST00000481739 DDX39AO00148 427 aaKnown RBP17.31■□□□□ 0.36
RXRA-202ENST00000481739 IGF2BP3O00425 579 aaKnown RBP eCLIP17.31■□□□□ 0.36
RXRA-202ENST00000481739 URI1O94763 535 aaPredicted RBP17.31■□□□□ 0.36
RXRA-202ENST00000481739 NR3C1P04150 777 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 KLK7P49862 253 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 ALDH5A1P51649 535 aaPredicted RBP17.31■□□□□ 0.36
RXRA-202ENST00000481739 NCBP1Q09161 790 aaKnown RBP17.31■□□□□ 0.36
RXRA-202ENST00000481739 MYBPC2Q14324 1141 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 ZNF746Q6NUN9 644 aaPredicted RBP17.31■□□□□ 0.36
RXRA-202ENST00000481739 HS2ST1Q7LGA3 356 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 FAM178BQ8IXR5 827 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 ACRBPQ8NEB7 543 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 INPP4AQ96PE3 977 aaPredicted RBP17.31■□□□□ 0.36
RXRA-202ENST00000481739 WDR24Q96S15 920 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 IWS1Q96ST2 819 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 NHEJ1Q9H9Q4 299 aaPredicted RBP17.31■□□□□ 0.36
RXRA-202ENST00000481739 FAM207AQ9NSI2 230 aaPredicted RBP17.31■□□□□ 0.36
RXRA-202ENST00000481739 LARSQ9P2J5 1176 aaKnown RBP17.31■□□□□ 0.36
RXRA-202ENST00000481739 WRAP73Q9P2S5 460 aaPredicted RBP17.31■□□□□ 0.36
RXRA-202ENST00000481739 PRPF6O94906 941 aaKnown RBP17.31■□□□□ 0.36
RXRA-202ENST00000481739 HOXD13P35453 343 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 PSMC5P62195 406 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 TAF1CQ15572 869 aaPredicted RBP17.31■□□□□ 0.36
RXRA-202ENST00000481739 STXBP2Q15833 593 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 ZNF720Q7Z2F6 126 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 CACNA2D4Q7Z3S7 1137 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 BANK1Q8NDB2 785 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 TSGA10Q9BZW7 698 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 CGNQ9P2M7 1197 aaKnown RBP17.31■□□□□ 0.36
RXRA-202ENST00000481739 MORF4L1Q9UBU8 362 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 SAMM50Q9Y512 469 aa17.31■□□□□ 0.36
RXRA-202ENST00000481739 ASTN1O14525 1302 aa17.3■□□□□ 0.36
RXRA-202ENST00000481739 ZNFX1Q9P2E3 1918 aaKnown RBP17.3■□□□□ 0.36
RXRA-202ENST00000481739 SOWAHBA6NEL2 793 aa17.3■□□□□ 0.36
RXRA-202ENST00000481739 KRT86O43790 486 aa17.3■□□□□ 0.36
RXRA-202ENST00000481739 XRCC5P13010 732 aaKnown RBP17.3■□□□□ 0.36
RXRA-202ENST00000481739 INHBEP58166 350 aa17.3■□□□□ 0.36
RXRA-202ENST00000481739 ODR4Q5SWX8 454 aa17.3■□□□□ 0.36
RXRA-202ENST00000481739 PADI6Q6TGC4 694 aa17.3■□□□□ 0.36
RXRA-202ENST00000481739 SMAP1Q8IYB5 467 aaPredicted RBP17.3■□□□□ 0.36
RXRA-202ENST00000481739 FAM133AQ8N9E0 248 aa17.3■□□□□ 0.36
RXRA-202ENST00000481739 TMEM174Q8WUU8 243 aa17.3■□□□□ 0.36
RXRA-202ENST00000481739 CCDC42Q96M95 316 aa17.3■□□□□ 0.36
RXRA-202ENST00000481739 CCDC43Q96MW1 224 aaKnown RBP17.3■□□□□ 0.36
RXRA-202ENST00000481739 ANKEF1Q9NU02 776 aa17.3■□□□□ 0.36
RXRA-202ENST00000481739 CPA4Q9UI42 421 aa17.3■□□□□ 0.36
RXRA-202ENST00000481739 SSU72P8A0A1W2PR75 194 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 GTPBP10A4D1E9 387 aaKnown RBP17.29■□□□□ 0.36
RXRA-202ENST00000481739 FAM155AB1AL88 458 aaPredicted RBP17.29■□□□□ 0.36
RXRA-202ENST00000481739 NKRFO15226 690 aaKnown RBP eCLIP17.29■□□□□ 0.361e-6■■■□□ 16
RXRA-202ENST00000481739 YY1P25490 414 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 ARHGAP25P42331 645 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 SREBF2Q12772 1141 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 FSTL1Q12841 308 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 SPA17Q15506 151 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 GNPTABQ3T906 1256 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 IFNL1Q8IU54 200 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 MNS1Q8NEH6 495 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 BAP1Q92560 729 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 FIZ1Q96SL8 496 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 MPHOSPH6Q99547 160 aaKnown RBP17.29■□□□□ 0.36
RXRA-202ENST00000481739 PLCB1Q9NQ66 1216 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 MRFAP1Q9Y605 127 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 IVNS1ABPQ9Y6Y0 642 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 NFASCO94856 1347 aa17.29■□□□□ 0.36
RXRA-202ENST00000481739 CTAGE9A4FU28 777 aa17.28■□□□□ 0.36
RXRA-202ENST00000481739 FANCGO15287 622 aa17.28■□□□□ 0.36
RXRA-202ENST00000481739 AFPP02771 609 aaKnown RBP17.28■□□□□ 0.36
RXRA-202ENST00000481739 RARRES1P49788 294 aa17.28■□□□□ 0.36
RXRA-202ENST00000481739 SNRPFP62306 86 aaKnown RBP17.28■□□□□ 0.36
RXRA-202ENST00000481739 TUBB4BP68371 445 aa17.28■□□□□ 0.36
RXRA-202ENST00000481739 KCNMA1Q12791 1236 aa17.28■□□□□ 0.36
RXRA-202ENST00000481739 KCNH2Q12809 1159 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms