RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 PCDHB7Q9Y5E2 793 aa13.69□□□□□ -0.22
SQSTM1-207ENST00000481335 PLXNA4Q9HCM2 1894 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 FSD2A1L4K1 749 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 HOXA2O43364 376 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 GPR32O75388 356 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 GCFC2P16383 781 aaKnown RBP13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 KCNA5P22460 613 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 UBE3AQ05086 875 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 NPY5RQ15761 445 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 CSPP1Q1MSJ5 1256 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 TCEAL5Q5H9L2 206 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 B3GNT9Q6UX72 402 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 METTL13Q8N6R0 699 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 TMEM40Q8WWA1 233 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 OSMRQ99650 979 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 SLKQ9H2G2 1235 aaPredicted RBP13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 AAASQ9NRG9 546 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 TMEM161AQ9NX61 479 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 ST3GAL5Q9UNP4 418 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 GINS2Q9Y248 185 aa13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 MRPL42Q9Y6G3 142 aaKnown RBP13.68□□□□□ -0.22
SQSTM1-207ENST00000481335 C9IYK1 514 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 ZNF862O60290 1169 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 DKC1O60832 514 aaKnown RBP eCLIP13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 PPFIA3O75145 1194 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 TBC1D8BQ0IIM8 1120 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 SCRN1Q12765 414 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 KIZQ2M2Z5 673 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 TMEM266Q2M3C6 531 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 XKR3Q5GH77 459 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 PPP4R3AQ6IN85 833 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 EFCAB12Q6NXP0 572 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 MIER3Q7Z3K6 550 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 FAM228AQ86W67 206 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 ETNPPLQ8TBG4 499 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 WASF1Q92558 559 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 NECAB3Q96P71 396 aaPredicted RBP13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 ADAM2Q99965 735 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 PHF20Q9BVI0 1012 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 NIFKQ9BYG3 293 aaKnown RBP13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 UNC45AQ9H3U1 944 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 PRKAG3Q9UGI9 489 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 AKT3Q9Y243 479 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 PPME1Q9Y570 386 aa13.67□□□□□ -0.22
SQSTM1-207ENST00000481335 GRXCR2A6NFK2 248 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 TBX3O15119 743 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 GRM6O15303 877 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 MGEA5O60502 916 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 PFKFB2O60825 505 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 TDP2O95551 362 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 VTNP04004 478 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 EIF4BP23588 611 aaKnown RBP13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 CLCN3P51790 818 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 FAM189BP81408 668 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 STK3Q13188 491 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 TARBP2Q15633 366 aaKnown RBP13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 CTC1Q2NKJ3 1217 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 PTCRAQ6ISU1 281 aaPredicted RBP13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 NEK8Q86SG6 692 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 FAM178BQ8IXR5 827 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 EXOC8Q8IYI6 725 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 FAM20AQ96MK3 541 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 JPH2Q9BR39 696 aaPredicted RBP13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 ADAMTS10Q9H324 1103 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 CDHR5Q9HBB8 845 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 DDX25Q9UHL0 483 aaKnown RBP13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 PCDHB12Q9Y5F1 795 aa13.66□□□□□ -0.22
SQSTM1-207ENST00000481335 CCDC194A0A1B0GVG4 234 aa13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 CARNS1A5YM72 827 aa13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 CHMP2AO43633 222 aa13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 ITGB1P05556 798 aa13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 ZSCAN20P17040 1043 aaPredicted RBP13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 GPC3P51654 580 aa13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 NLRP11P59045 1033 aaKnown RBP13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 PPP2R5CQ13362 524 aa13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 DSC3Q14574 896 aa13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 PDE12Q6L8Q7 609 aaKnown RBP13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 UIMC1Q96RL1 719 aa13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 ATP6V0A4Q9HBG4 840 aa13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 KCNMB3Q9NPA1 279 aa13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 CLDND1Q9NY35 253 aa13.65□□□□□ -0.22
SQSTM1-207ENST00000481335 ARID2Q68CP9 1835 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 IGKV6-21A0A0C4DH24 114 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 RBAK-RBAKDNI3L0D1 243 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 DARSP14868 501 aaKnown RBP13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 LAG3P18627 525 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 DNM2P50570 870 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 PSMC5P62195 406 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 UGCGQ16739 394 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 INF2Q27J81 1249 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 PAN2Q504Q3 1202 aaKnown RBP13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 ZNF410Q86VK4 478 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 LRRC71Q8N4P6 559 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 KLHL23Q8NBE8 558 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 SPPL3Q8TCT6 385 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 TRAIPQ9BWF2 469 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 INO80BQ9C086 356 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 TMEM117Q9H0C3 514 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms