RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 FAM49AQ9H0Q0 323 aaPredicted RBP20.92■□□□□ 0.94
CCM2-214ENST00000481194 PPP1R7Q15435 360 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 ATP8B3O60423 1300 aa20.92■□□□□ 0.94
CCM2-214ENST00000481194 SYTL5Q8TDW5 730 aaPredicted RBP20.91■□□□□ 0.94
CCM2-214ENST00000481194 HERVK_113P62684 666 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 CALCOCO2Q13137 446 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 HOXC6P09630 235 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 EDRF1Q3B7T1 1238 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 GPD1LQ8N335 351 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 EDEM3Q9BZQ6 932 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 STMN4Q9H169 189 aaPredicted RBP20.91■□□□□ 0.94
CCM2-214ENST00000481194 HYOU1Q9Y4L1 999 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 HBP1O60381 514 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 HADHQ16836 314 aaKnown RBP20.91■□□□□ 0.94
CCM2-214ENST00000481194 SYT17Q9BSW7 474 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 APOL6Q9BWW8 343 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 GLIS2Q9BZE0 524 aaPredicted RBP20.91■□□□□ 0.94
CCM2-214ENST00000481194 NKRFO15226 690 aaKnown RBP eCLIP20.91■□□□□ 0.94
CCM2-214ENST00000481194 MFAP3LO75121 409 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 PRKCEQ02156 737 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 ZNF568Q3ZCX4 644 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 SYT2Q8N9I0 419 aaPredicted RBP20.91■□□□□ 0.94
CCM2-214ENST00000481194 REEP2Q9BRK0 252 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 SNX25Q9H3E2 840 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 HPSEQ9Y251 543 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 NUB1Q9Y5A7 615 aa20.91■□□□□ 0.94
CCM2-214ENST00000481194 RHPN2Q8IUC4 686 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 RNF34Q969K3 372 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 UNC45AQ9H3U1 944 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 TRIM49BA6NDI0 452 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 STRNO43815 780 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 CYP3A4P08684 503 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 CPT1AP50416 773 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 UBE2TQ9NPD8 197 aaPredicted RBP20.9■□□□□ 0.94
CCM2-214ENST00000481194 ERAP1Q9NZ08 941 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 NHSQ6T4R5 1651 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 RRN3P2A6NIE6 340 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 FOXN1O15353 648 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 TAF3Q5VWG9 929 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 MYMKA6NI61 221 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 ATP1A3P13637 1013 aa20.9■□□□□ 0.94
CCM2-214ENST00000481194 LIMA1Q9UHB6 759 aaKnown RBP20.9■□□□□ 0.94
CCM2-214ENST00000481194 NID2Q14112 1375 aa20.89■□□□□ 0.94
CCM2-214ENST00000481194 ZBTB22O15209 634 aa20.89■□□□□ 0.94
CCM2-214ENST00000481194 VGLL4Q14135 290 aa20.89■□□□□ 0.94
CCM2-214ENST00000481194 EMC2Q15006 297 aa20.89■□□□□ 0.94
CCM2-214ENST00000481194 LCMT1Q9UIC8 334 aa20.89■□□□□ 0.94
CCM2-214ENST00000481194 ABCA3Q99758 1704 aa20.89■□□□□ 0.94
CCM2-214ENST00000481194 STK10O94804 968 aaKnown RBP20.89■□□□□ 0.93
CCM2-214ENST00000481194 TCP1P17987 556 aaKnown RBP20.89■□□□□ 0.93
CCM2-214ENST00000481194 VAMP7P51809 220 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 ZRSR2Q15696 482 aaKnown RBP20.89■□□□□ 0.93
CCM2-214ENST00000481194 SESTD1Q86VW0 696 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 PPFIA1Q13136 1202 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 ENOSF1Q7L5Y1 443 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 MAATS1Q7Z4T9 603 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 TAX1BP1Q86VP1 789 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 CATSPER3Q86XQ3 398 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 IFT122Q9HBG6 1241 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 IKBKGQ9Y6K9 419 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 OATP04181 439 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 DGKDQ16760 1214 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 CATSPERGQ6ZRH7 1159 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 ZNF354CQ86Y25 554 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 SLC38A10Q9HBR0 1119 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 FEZ2Q9UHY8 353 aaPredicted RBP20.89■□□□□ 0.93
CCM2-214ENST00000481194 SAR1BQ9Y6B6 198 aa20.89■□□□□ 0.93
CCM2-214ENST00000481194 GPC3P51654 580 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 AMIGO3Q86WK7 504 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 EEF2KMTQ96G04 330 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 PDCD2LQ9BRP1 358 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 HAUS2Q9NVX0 235 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 PRKAG2Q9UGJ0 569 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 PIK3CDO00329 1044 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 C8orf74Q6P047 294 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 ANKRD13CQ8N6S4 541 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 CCDC114Q96M63 670 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 TGFB3P10600 412 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 TBXAS1P24557 533 aaPredicted RBP20.88■□□□□ 0.93
CCM2-214ENST00000481194 SLC26A2P50443 739 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 IER5Q5VY09 327 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.88■□□□□ 0.93
CCM2-214ENST00000481194 GOLGA8IPA6NC78 632 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 GOLGA8JA6NMD2 632 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 ATP2A2P16615 1042 aaKnown RBP20.88■□□□□ 0.93
CCM2-214ENST00000481194 INHBEP58166 350 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 DAAM2Q86T65 1068 aa20.88■□□□□ 0.93
CCM2-214ENST00000481194 SUCLA2Q9P2R7 463 aaPredicted RBP20.88■□□□□ 0.93
CCM2-214ENST00000481194 OPA1O60313 960 aa20.87■□□□□ 0.93
CCM2-214ENST00000481194 TRPM4Q8TD43 1214 aa20.87■□□□□ 0.93
CCM2-214ENST00000481194 AGO4Q9HCK5 861 aaKnown RBP20.87■□□□□ 0.93
CCM2-214ENST00000481194 ITGB4P16144 1822 aa20.87■□□□□ 0.93
CCM2-214ENST00000481194 PDHXO00330 501 aa20.87■□□□□ 0.93
CCM2-214ENST00000481194 THAP12O43422 761 aa20.87■□□□□ 0.93
CCM2-214ENST00000481194 ETF1P62495 437 aaKnown RBP20.87■□□□□ 0.93
CCM2-214ENST00000481194 MAP1SQ66K74 1059 aaPredicted RBP20.87■□□□□ 0.93
CCM2-214ENST00000481194 GLI3P10071 1580 aa20.87■□□□□ 0.93
CCM2-214ENST00000481194 GLTPD2A6NH11 291 aa20.87■□□□□ 0.93
CCM2-214ENST00000481194 CEP104O60308 925 aa20.87■□□□□ 0.93
CCM2-214ENST00000481194 KCNH2Q12809 1159 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms