RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 MYH9P35579 1960 aaKnown RBP22.59■■□□□ 1.21
VPS36-204ENST00000480923 SIP14410 1827 aa22.59■■□□□ 1.21
VPS36-204ENST00000480923 PTPRSQ13332 1948 aa22.59■■□□□ 1.21
VPS36-204ENST00000480923 GPR32O75388 356 aa22.58■■□□□ 1.21
VPS36-204ENST00000480923 NLRP11P59045 1033 aaKnown RBP22.58■■□□□ 1.21
VPS36-204ENST00000480923 HTRA4P83105 476 aaPredicted RBP22.58■■□□□ 1.21
VPS36-204ENST00000480923 CTTNQ14247 550 aaKnown RBP22.58■■□□□ 1.21
VPS36-204ENST00000480923 ZNF174Q15697 407 aa22.58■■□□□ 1.21
VPS36-204ENST00000480923 ODR4Q5SWX8 454 aa22.58■■□□□ 1.21
VPS36-204ENST00000480923 ANO5Q75V66 913 aa22.58■■□□□ 1.21
VPS36-204ENST00000480923 TMEM40Q8WWA1 233 aa22.58■■□□□ 1.21
VPS36-204ENST00000480923 SCLT1Q96NL6 688 aa22.58■■□□□ 1.21
VPS36-204ENST00000480923 MTMR9Q96QG7 549 aa22.58■■□□□ 1.21
VPS36-204ENST00000480923 TMEM60Q9H2L4 133 aa22.58■■□□□ 1.21
VPS36-204ENST00000480923 WRAP73Q9P2S5 460 aaPredicted RBP22.58■■□□□ 1.21
VPS36-204ENST00000480923 MICAL3Q7RTP6 2002 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 LINC01553A4QN01 128 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 RFXAPO00287 272 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 GJB2P29033 226 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 ADGRE1Q14246 886 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 TTC38Q5R3I4 469 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 SPRED2Q7Z698 418 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 TPH2Q8IWU9 490 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 C4orf19Q8IY42 314 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 LINC01599Q8WXQ3 324 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 ZNF668Q96K58 619 aaPredicted RBP22.57■■□□□ 1.2
VPS36-204ENST00000480923 CEP170P1Q96L14 293 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 CEP89Q96ST8 783 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 EIF2AK1Q9BQI3 630 aaKnown RBP22.57■■□□□ 1.2
VPS36-204ENST00000480923 ZSWIM4Q9H7M6 989 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 ERVK-5Q9HDB9 667 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 CYP26B1Q9NR63 512 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 SMC3Q9UQE7 1217 aa22.57■■□□□ 1.2
VPS36-204ENST00000480923 GPR182O15218 404 aa22.56■■□□□ 1.2
VPS36-204ENST00000480923 DNM2P50570 870 aa22.56■■□□□ 1.2
VPS36-204ENST00000480923 NPEPPSP55786 919 aa22.56■■□□□ 1.2
VPS36-204ENST00000480923 ORC2Q13416 577 aaPredicted RBP22.56■■□□□ 1.2
VPS36-204ENST00000480923 ZNF710Q8N1W2 664 aa22.56■■□□□ 1.2
VPS36-204ENST00000480923 TGS1Q96RS0 853 aaKnown RBP22.56■■□□□ 1.2
VPS36-204ENST00000480923 JPH2Q9BR39 696 aaPredicted RBP22.56■■□□□ 1.2
VPS36-204ENST00000480923 TMX1Q9H3N1 280 aa22.56■■□□□ 1.2
VPS36-204ENST00000480923 MTUS1Q9ULD2 1270 aa22.56■■□□□ 1.2
VPS36-204ENST00000480923 ST3GAL5Q9UNP4 418 aa22.56■■□□□ 1.2
VPS36-204ENST00000480923 EPOPA6NHQ4 379 aa22.55■■□□□ 1.2
VPS36-204ENST00000480923 MAFO75444 373 aaPredicted RBP22.55■■□□□ 1.2
VPS36-204ENST00000480923 OR52Z1P0C646 297 aa22.55■■□□□ 1.2
VPS36-204ENST00000480923 U2AF2P26368 475 aaKnown RBP eCLIP22.55■■□□□ 1.2
VPS36-204ENST00000480923 YWHABP31946 246 aaKnown RBP22.55■■□□□ 1.2
VPS36-204ENST00000480923 TRAPPC10P48553 1259 aa22.55■■□□□ 1.2
VPS36-204ENST00000480923 GPC3P51654 580 aa22.55■■□□□ 1.2
VPS36-204ENST00000480923 DRP2Q13474 957 aa22.55■■□□□ 1.2
VPS36-204ENST00000480923 MCTP1Q6DN14 999 aa22.55■■□□□ 1.2
VPS36-204ENST00000480923 OTUD6AQ7L8S5 288 aa22.55■■□□□ 1.2
VPS36-204ENST00000480923 RTN4RL1Q86UN2 441 aaPredicted RBP22.55■■□□□ 1.2
VPS36-204ENST00000480923 SLC17A8Q8NDX2 589 aa22.55■■□□□ 1.2
VPS36-204ENST00000480923 TSPYL2Q9H2G4 693 aaPredicted RBP22.55■■□□□ 1.2
VPS36-204ENST00000480923 ADAMTS10Q9H324 1103 aa22.55■■□□□ 1.2
VPS36-204ENST00000480923 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.55■■□□□ 1.2
VPS36-204ENST00000480923 CDH23Q9H251 3354 aa22.54■■□□□ 1.2
VPS36-204ENST00000480923 IGKV6-21A0A0C4DH24 114 aa22.54■■□□□ 1.2
VPS36-204ENST00000480923 H3BQV1 296 aa22.54■■□□□ 1.2
VPS36-204ENST00000480923 SLITRK3O94933 977 aa22.54■■□□□ 1.2
VPS36-204ENST00000480923 IBSPP21815 317 aaPredicted RBP22.54■■□□□ 1.2
VPS36-204ENST00000480923 POLGP54098 1239 aaPredicted RBP22.54■■□□□ 1.2
VPS36-204ENST00000480923 FAM228AQ86W67 206 aa22.54■■□□□ 1.2
VPS36-204ENST00000480923 NEK9Q8TD19 979 aa22.54■■□□□ 1.2
VPS36-204ENST00000480923 SP7Q8TDD2 431 aaPredicted RBP22.54■■□□□ 1.2
VPS36-204ENST00000480923 NLRP7Q8WX94 980 aa22.54■■□□□ 1.2
VPS36-204ENST00000480923 SLC7A3Q8WY07 619 aa22.54■■□□□ 1.2
VPS36-204ENST00000480923 PPM1EQ8WY54 764 aa22.54■■□□□ 1.2
VPS36-204ENST00000480923 SUCLA2Q9P2R7 463 aaPredicted RBP22.54■■□□□ 1.2
VPS36-204ENST00000480923 CHD9Q3L8U1 2897 aa22.53■■□□□ 1.2
VPS36-204ENST00000480923 DENND3A2RUS2 1198 aa22.53■■□□□ 1.2
VPS36-204ENST00000480923 POTEMA6NI47 508 aa22.53■■□□□ 1.2
VPS36-204ENST00000480923 ERVK-21P61565 698 aa22.53■■□□□ 1.2
VPS36-204ENST00000480923 NBR1Q14596 966 aa22.53■■□□□ 1.2
VPS36-204ENST00000480923 XKR9Q5GH70 373 aa22.53■■□□□ 1.2
VPS36-204ENST00000480923 ZNF579Q8NAF0 562 aaKnown RBP22.53■■□□□ 1.2
VPS36-204ENST00000480923 HSD17B14Q9BPX1 270 aa22.53■■□□□ 1.2
VPS36-204ENST00000480923 PPME1Q9Y570 386 aa22.53■■□□□ 1.2
VPS36-204ENST00000480923 COL6A3P12111 3177 aa22.52■■□□□ 1.2
VPS36-204ENST00000480923 ZBTB39O15060 712 aa22.52■■□□□ 1.2
VPS36-204ENST00000480923 GTPBP6O43824 516 aaPredicted RBP22.52■■□□□ 1.2
VPS36-204ENST00000480923 MGEA5O60502 916 aa22.52■■□□□ 1.2
VPS36-204ENST00000480923 STAG3L1P0CL83 205 aa22.52■■□□□ 1.2
VPS36-204ENST00000480923 EIF4BP23588 611 aaKnown RBP22.52■■□□□ 1.2
VPS36-204ENST00000480923 RFC5P40937 340 aa22.52■■□□□ 1.2
VPS36-204ENST00000480923 TECP42680 631 aa22.52■■□□□ 1.2
VPS36-204ENST00000480923 CDC42EP1Q00587 391 aa22.52■■□□□ 1.2
VPS36-204ENST00000480923 FAM43BQ6ZT52 329 aaPredicted RBP22.52■■□□□ 1.2
VPS36-204ENST00000480923 NPAS4Q8IUM7 802 aa22.52■■□□□ 1.2
VPS36-204ENST00000480923 EXOC8Q8IYI6 725 aa22.52■■□□□ 1.2
VPS36-204ENST00000480923 MICALL1Q8N3F8 863 aa22.52■■□□□ 1.2
VPS36-204ENST00000480923 ADAM2Q99965 735 aa22.52■■□□□ 1.2
VPS36-204ENST00000480923 C17orf80Q9BSJ5 609 aa22.52■■□□□ 1.2
VPS36-204ENST00000480923 BMP2KQ9NSY1 1161 aaPredicted RBP22.52■■□□□ 1.2
VPS36-204ENST00000480923 LRFN2Q9ULH4 789 aa22.52■■□□□ 1.2
VPS36-204ENST00000480923 WDR81Q562E7 1941 aa22.51■■□□□ 1.19
VPS36-204ENST00000480923 DARSP14868 501 aaKnown RBP22.51■■□□□ 1.19
VPS36-204ENST00000480923 GRB10Q13322 594 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms