RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 RASAL2Q9UJF2 1139 aa14.09□□□□□ -0.15
LYSMD4-206ENST00000479791 HDAC9Q9UKV0 1011 aa14.09□□□□□ -0.15
LYSMD4-206ENST00000479791 O00370 1275 aa14.09□□□□□ -0.15
LYSMD4-206ENST00000479791 KIAA0391O15091 583 aaKnown RBP14.09□□□□□ -0.15
LYSMD4-206ENST00000479791 SUN1O94901 812 aa14.09□□□□□ -0.15
LYSMD4-206ENST00000479791 NTSR2O95665 410 aa14.09□□□□□ -0.15
LYSMD4-206ENST00000479791 PON1P27169 355 aa14.09□□□□□ -0.15
LYSMD4-206ENST00000479791 EXOC3L4Q17RC7 722 aa14.09□□□□□ -0.15
LYSMD4-206ENST00000479791 FGFBP2Q9BYJ0 223 aa14.09□□□□□ -0.15
LYSMD4-206ENST00000479791 KIF9Q9HAQ2 790 aa14.09□□□□□ -0.15
LYSMD4-206ENST00000479791 STX8Q9UNK0 236 aa14.09□□□□□ -0.15
LYSMD4-206ENST00000479791 WTIPA6NIX2 430 aaPredicted RBP14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 hCG_1984214I3L0E3 225 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 DDX3YO15523 660 aaKnown RBP14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 AFPP02771 609 aaKnown RBP14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 PLTPP55058 493 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 ECM1Q16610 540 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 DNAAF5Q86Y56 855 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 EGFL6Q8IUX8 553 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 ZNF713Q8N859 430 aaPredicted RBP14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 FBXO25Q8TCJ0 367 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 EMILIN3Q9NT22 766 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 BSDC1Q9NW68 430 aaPredicted RBP14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 PARP2Q9UGN5 583 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 MTMR7Q9Y216 660 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 RPTORQ8N122 1335 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 BCL9O00512 1426 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 ITGB4P16144 1822 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 LAMB2P55268 1798 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 DDX3XO00571 662 aaKnown RBP eCLIP14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 JAM2P57087 298 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 MAPK7Q13164 816 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 KCTD19Q17RG1 926 aaPredicted RBP14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 HYIQ5T013 277 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 MFSD5Q6N075 450 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 JAMLQ86YT9 394 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 ZNF444Q8N0Y2 327 aaPredicted RBP14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 TBC1D16Q8TBP0 767 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 MICAL1Q8TDZ2 1067 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 DYNLL2Q96FJ2 89 aa14.08□□□□□ -0.16
LYSMD4-206ENST00000479791 NCANO14594 1321 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 TDP2O95551 362 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 ATP2A2P16615 1042 aaKnown RBP14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 MSH2P43246 934 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 DCAF12L1Q5VU92 463 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 ASRGL1Q7L266 308 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 NT5C3AQ9H0P0 336 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 TMEM260Q9NX78 707 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 TBC1D7Q9P0N9 293 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 ARMCX3Q9UH62 379 aaPredicted RBP14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 EDIL3O43854 480 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 WFS1O76024 890 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 KRT16P08779 473 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 NR2F2P24468 414 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 IFNAR2P48551 515 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 GALCP54803 685 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 LACTBP83111 547 aaPredicted RBP14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 ATP11AP98196 1134 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 PPATQ06203 517 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 SF3A3Q12874 501 aaKnown RBP eCLIP14.07□□□□□ -0.169e-7■■■■□ 24.7
LYSMD4-206ENST00000479791 ANKRD20A2Q5SQ80 823 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 ANKRD20A1Q5TYW2 823 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 ANKRD20A3Q5VUR7 823 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 RFFLQ8WZ73 363 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 CPVLQ9H3G5 476 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 MTRF1LQ9UGC7 380 aaKnown RBP14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 KDM3AQ9Y4C1 1321 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 GJB6O95452 261 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 PRDX5P30044 214 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 PLS1Q14651 629 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 HERC4Q5GLZ8 1057 aaPredicted RBP14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 ERICH1Q86X53 443 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 GLG1Q92896 1179 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 ROPN1BQ9BZX4 212 aaPredicted RBP14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 SEMA4AQ9H3S1 761 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 ROPN1Q9HAT0 212 aaPredicted RBP14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 GRHL1Q9NZI5 618 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 SNX24Q9Y343 169 aa14.07□□□□□ -0.16
LYSMD4-206ENST00000479791 COL4A1P02462 1669 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 A6NHS1 94 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 PODXLO00592 558 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 RASGRF2O14827 1237 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 TMEM253P0C7T8 217 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 FERP16591 822 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 SKIV2L2P42285 1042 aaKnown RBP14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 AUHQ13825 339 aaKnown RBP14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 SLC4A8Q2Y0W8 1093 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 TEX9Q8N6V9 391 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 U2AF1L4Q8WU68 220 aaKnown RBP14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 PRCCQ92733 491 aaPredicted RBP14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 RXFP1Q9HBX9 757 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 PPP1R9AQ9ULJ8 1098 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 MINPP1Q9UNW1 487 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 TRAF3IP3Q9Y228 551 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 ARL2BPQ9Y2Y0 163 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 CD2APQ9Y5K6 639 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 KLHL33A6NCF5 533 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 ANKRD33BA6NCL7 494 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 SMIM23A6NLE4 172 aa14.06□□□□□ -0.16
LYSMD4-206ENST00000479791 HSPA6P17066 643 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms