RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TFDP1Q14186 410 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 MCPH1Q8NEM0 835 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 ZCCHC17Q9NP64 241 aaKnown RBP15.47■□□□□ 0.07
COL20A1-206ENST00000479501 CAMTA1Q9Y6Y1 1673 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 MAGEA9P43362 315 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 NFRKBQ6P4R8 1299 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 FRMD5Q7Z6J6 570 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 WRNIP1Q96S55 665 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 ATP8A1Q9Y2Q0 1164 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 CCDC188H7C350 402 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 THAP12O43422 761 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 ATF2P15336 505 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 GLE1Q53GS7 698 aaKnown RBP15.47■□□□□ 0.07
COL20A1-206ENST00000479501 WHAMMQ8TF30 809 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 RSAD2Q8WXG1 361 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 RUNDC3BQ96NL0 473 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 NFU1Q9UMS0 254 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 KIF1AQ12756 1690 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 RGL2O15211 777 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 SLC16A4O15374 487 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 STAM2O75886 525 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 RNF8O76064 485 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 AP1ARQ63HQ0 302 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 PPP1R21Q6ZMI0 780 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 MORC2Q9Y6X9 1032 aaPredicted RBP15.47■□□□□ 0.07
COL20A1-206ENST00000479501 NFAT5O94916 1531 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 WTIPA6NIX2 430 aaPredicted RBP15.46■□□□□ 0.07
COL20A1-206ENST00000479501 NOL3O60936 208 aaKnown RBP15.46■□□□□ 0.07
COL20A1-206ENST00000479501 DHX9Q08211 1270 aaKnown RBP15.46■□□□□ 0.07
COL20A1-206ENST00000479501 KAZNQ674X7 775 aa15.46■□□□□ 0.07
COL20A1-206ENST00000479501 SNRNP48Q6IEG0 339 aaKnown RBP15.46■□□□□ 0.07
COL20A1-206ENST00000479501 NSUN6Q8TEA1 469 aaKnown RBP15.46■□□□□ 0.07
COL20A1-206ENST00000479501 DAPK3O43293 454 aa15.46■□□□□ 0.07
COL20A1-206ENST00000479501 CTIFO43310 598 aaKnown RBP15.46■□□□□ 0.07
COL20A1-206ENST00000479501 MUM1Q2TAK8 710 aa15.46■□□□□ 0.07
COL20A1-206ENST00000479501 CCDC14Q49A88 953 aa15.46■□□□□ 0.07
COL20A1-206ENST00000479501 EARS2Q5JPH6 523 aaKnown RBP15.46■□□□□ 0.07
COL20A1-206ENST00000479501 ALS2CLQ60I27 953 aa15.46■□□□□ 0.07
COL20A1-206ENST00000479501 TUFT1Q9NNX1 390 aa15.46■□□□□ 0.07
COL20A1-206ENST00000479501 FAM205AQ6ZU69 1335 aa15.46■□□□□ 0.07
COL20A1-206ENST00000479501 FGGP02679 453 aa15.46■□□□□ 0.07
COL20A1-206ENST00000479501 NMT1P30419 496 aaKnown RBP15.46■□□□□ 0.07
COL20A1-206ENST00000479501 TFAMQ00059 246 aaKnown RBP15.46■□□□□ 0.07
COL20A1-206ENST00000479501 DRAP1Q14919 205 aaPredicted RBP15.46■□□□□ 0.07
COL20A1-206ENST00000479501 SGO2Q562F6 1265 aa15.46■□□□□ 0.07
COL20A1-206ENST00000479501 SDCCAG8Q86SQ7 713 aaPredicted RBP15.46■□□□□ 0.07
COL20A1-206ENST00000479501 RIC1Q4ADV7 1423 aa15.46■□□□□ 0.06
COL20A1-206ENST00000479501 NCK2O43639 380 aa15.46■□□□□ 0.06
COL20A1-206ENST00000479501 NFIAQ12857 509 aa15.46■□□□□ 0.06
COL20A1-206ENST00000479501 BFSP1Q12934 665 aa15.46■□□□□ 0.06
COL20A1-206ENST00000479501 TCP11Q8WWU5 503 aa15.46■□□□□ 0.06
COL20A1-206ENST00000479501 NBPF3Q9H094 633 aa15.46■□□□□ 0.06
COL20A1-206ENST00000479501 DLG5Q8TDM6 1919 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 TRIM49P0CI25 452 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 TRIM49CP0CI26 452 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 SFNP31947 248 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 EN1Q05925 392 aaPredicted RBP15.45■□□□□ 0.06
COL20A1-206ENST00000479501 PHLDB2Q86SQ0 1253 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 GBP5Q96PP8 586 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 REEP2Q9BRK0 252 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 MRPL47Q9HD33 250 aaKnown RBP15.45■□□□□ 0.06
COL20A1-206ENST00000479501 KBTBD4Q9NVX7 518 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
COL20A1-206ENST00000479501 PEAK1Q9H792 1746 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 MAN1A1P33908 653 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 SCYL2Q6P3W7 929 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 REXO1L1PQ8IX06 675 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 BBOF1Q8ND07 529 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 ANKRD7Q92527 254 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 CCDC97Q96F63 343 aaPredicted RBP15.45■□□□□ 0.06
COL20A1-206ENST00000479501 IL17RBQ9NRM6 502 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 HOXC10Q9NYD6 342 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 HESX1Q9UBX0 185 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 ZNRF3Q9ULT6 936 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 NOD1Q9Y239 953 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 TXNDC9O14530 226 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 HDLBPQ00341 1268 aaKnown RBP15.45■□□□□ 0.06
COL20A1-206ENST00000479501 MIS12Q9H081 205 aa15.45■□□□□ 0.06
COL20A1-206ENST00000479501 SLC37A4O43826 429 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 VAMP7P51809 220 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 SLC5A4Q9NY91 659 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 SSU72P8A0A1W2PR75 194 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 DENND3A2RUS2 1198 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 KIF3CO14782 793 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 STK10O94804 968 aaKnown RBP15.44■□□□□ 0.06
COL20A1-206ENST00000479501 PSMC5P62195 406 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 SLFN12LQ6IEE8 588 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 MMS22LQ6ZRQ5 1243 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 FAM151AQ8WW52 585 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 P3H4Q92791 437 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 RNF34Q969K3 372 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 ECEL1O95672 775 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 FDX1P10109 184 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 RPA1P27694 616 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 SNX1Q13596 522 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 RASA3Q14644 834 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 EDRF1Q3B7T1 1238 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 CERKQ8TCT0 537 aa15.44■□□□□ 0.06
COL20A1-206ENST00000479501 RAB3IPQ96QF0 476 aaPredicted RBP15.44■□□□□ 0.06
COL20A1-206ENST00000479501 SPATS2LQ9NUQ6 558 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms