RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SLC7A3Q8WY07 619 aa17.3■□□□□ 0.36
C9orf3-217ENST00000479161 NACC1Q96RE7 527 aa17.3■□□□□ 0.36
C9orf3-217ENST00000479161 FTHL17Q9BXU8 183 aa17.3■□□□□ 0.36
C9orf3-217ENST00000479161 IFIH1Q9BYX4 1025 aaKnown RBP17.3■□□□□ 0.36
C9orf3-217ENST00000479161 FAM49AQ9H0Q0 323 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-217ENST00000479161 DBR1Q9UK59 544 aaKnown RBP17.3■□□□□ 0.36
C9orf3-217ENST00000479161 VPS37CA5D8V6 355 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-217ENST00000479161 GPR32O75388 356 aa17.29■□□□□ 0.36
C9orf3-217ENST00000479161 RESTQ13127 1097 aa17.29■□□□□ 0.36
C9orf3-217ENST00000479161 CTTNQ14247 550 aaKnown RBP17.29■□□□□ 0.36
C9orf3-217ENST00000479161 NBR1Q14596 966 aa17.29■□□□□ 0.36
C9orf3-217ENST00000479161 RAB30Q15771 203 aa17.29■□□□□ 0.36
C9orf3-217ENST00000479161 MTERF2Q49AM1 385 aa17.29■□□□□ 0.36
C9orf3-217ENST00000479161 METTL13Q8N6R0 699 aa17.29■□□□□ 0.36
C9orf3-217ENST00000479161 CEP170P1Q96L14 293 aa17.29■□□□□ 0.36
C9orf3-217ENST00000479161 AK8Q96MA6 479 aa17.29■□□□□ 0.36
C9orf3-217ENST00000479161 LRWD1Q9UFC0 647 aa17.29■□□□□ 0.36
C9orf3-217ENST00000479161 PTPRSQ13332 1948 aa17.28■□□□□ 0.36
C9orf3-217ENST00000479161 ASAP2O43150 1006 aa17.28■□□□□ 0.36
C9orf3-217ENST00000479161 DGAT1O75907 488 aa17.28■□□□□ 0.36
C9orf3-217ENST00000479161 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
C9orf3-217ENST00000479161 ATP2A2P16615 1042 aaKnown RBP17.28■□□□□ 0.36
C9orf3-217ENST00000479161 KCNJ6P48051 423 aa17.28■□□□□ 0.36
C9orf3-217ENST00000479161 WDR5P61964 334 aaKnown RBP17.28■□□□□ 0.36
C9orf3-217ENST00000479161 CYP4A11Q02928 519 aa17.28■□□□□ 0.36
C9orf3-217ENST00000479161 ZNF410Q86VK4 478 aa17.28■□□□□ 0.36
C9orf3-217ENST00000479161 TCP11Q8WWU5 503 aa17.28■□□□□ 0.36
C9orf3-217ENST00000479161 ZBTB10Q96DT7 871 aa17.28■□□□□ 0.36
C9orf3-217ENST00000479161 ADAMTS10Q9H324 1103 aa17.28■□□□□ 0.36
C9orf3-217ENST00000479161 PCDHA11Q9Y5I1 949 aa17.28■□□□□ 0.36
C9orf3-217ENST00000479161 MYO9BQ13459 2157 aa17.28■□□□□ 0.36
C9orf3-217ENST00000479161 GBF1Q92538 1859 aa17.27■□□□□ 0.36
C9orf3-217ENST00000479161 GPR182O15218 404 aa17.27■□□□□ 0.36
C9orf3-217ENST00000479161 GHRP10912 638 aa17.27■□□□□ 0.36
C9orf3-217ENST00000479161 RARRES1P49788 294 aa17.27■□□□□ 0.36
C9orf3-217ENST00000479161 CLCN3P51790 818 aa17.27■□□□□ 0.36
C9orf3-217ENST00000479161 POU5F1BQ06416 359 aa17.27■□□□□ 0.36
C9orf3-217ENST00000479161 HYIQ5T013 277 aa17.27■□□□□ 0.36
C9orf3-217ENST00000479161 TRMT1LQ7Z2T5 733 aaKnown RBP17.27■□□□□ 0.36
C9orf3-217ENST00000479161 AGO3Q9H9G7 860 aaKnown RBP17.27■□□□□ 0.36
C9orf3-217ENST00000479161 SUGCTQ9HAC7 445 aa17.27■□□□□ 0.36
C9orf3-217ENST00000479161 RNF216Q9NWF9 866 aaPredicted RBP17.27■□□□□ 0.36
C9orf3-217ENST00000479161 DAXXQ9UER7 740 aaPredicted RBP17.27■□□□□ 0.36
C9orf3-217ENST00000479161 ZBBXA8MT70 800 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 MED24O75448 989 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 EIF4BP23588 611 aaKnown RBP17.26■□□□□ 0.35
C9orf3-217ENST00000479161 GPC3P51654 580 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 POLGP54098 1239 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-217ENST00000479161 NPEPPSP55786 919 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 NLRP11P59045 1033 aaKnown RBP17.26■□□□□ 0.35
C9orf3-217ENST00000479161 IL17AQ16552 155 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 TCTN1Q2MV58 587 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 XKR9Q5GH70 373 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 KRT79Q5XKE5 535 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 HERC6Q8IVU3 1022 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 LRRC71Q8N4P6 559 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 LRCH3Q96II8 777 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 OSBPL7Q9BZF2 842 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 INO80BQ9C086 356 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-217ENST00000479161 MSRAQ9UJ68 235 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 PADI3Q9ULW8 664 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 AKT3Q9Y243 479 aa17.26■□□□□ 0.35
C9orf3-217ENST00000479161 TMEM150BA6NC51 233 aa17.25■□□□□ 0.35
C9orf3-217ENST00000479161 RPS6KA5O75582 802 aa17.25■□□□□ 0.35
C9orf3-217ENST00000479161 GJB5O95377 273 aa17.25■□□□□ 0.35
C9orf3-217ENST00000479161 AMHP03971 560 aa17.25■□□□□ 0.35
C9orf3-217ENST00000479161 VTNP04004 478 aa17.25■□□□□ 0.35
C9orf3-217ENST00000479161 DNAJB2P25686 324 aa17.25■□□□□ 0.35
C9orf3-217ENST00000479161 MXD4Q14582 209 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-217ENST00000479161 PCBP1Q15365 356 aaKnown RBP eCLIP17.25■□□□□ 0.35
C9orf3-217ENST00000479161 PLA2G4FQ68DD2 849 aa17.25■□□□□ 0.35
C9orf3-217ENST00000479161 ATL3Q6DD88 541 aa17.25■□□□□ 0.35
C9orf3-217ENST00000479161 FERMT3Q86UX7 667 aa17.25■□□□□ 0.35
C9orf3-217ENST00000479161 PSPC1Q8WXF1 523 aaKnown RBP17.25■□□□□ 0.35
C9orf3-217ENST00000479161 TOP1MTQ969P6 601 aa17.25■□□□□ 0.35
C9orf3-217ENST00000479161 PBX4Q9BYU1 374 aa17.25■□□□□ 0.35
C9orf3-217ENST00000479161 TSPYL2Q9H2G4 693 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-217ENST00000479161 ERVK-5Q9HDB9 667 aa17.25■□□□□ 0.35
C9orf3-217ENST00000479161 SUCLA2Q9P2R7 463 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-217ENST00000479161 MYH15Q9Y2K3 1946 aa17.25■□□□□ 0.35
C9orf3-217ENST00000479161 COL4A6Q14031 1691 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-217ENST00000479161 ENPP3O14638 875 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 ZBTB39O15060 712 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 DARSP14868 501 aaKnown RBP17.24■□□□□ 0.35
C9orf3-217ENST00000479161 LONP1P36776 959 aaKnown RBP17.24■□□□□ 0.35
C9orf3-217ENST00000479161 TMEM62Q0P6H9 643 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 PAK2Q13177 524 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 EMC2Q15006 297 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 PTPAQ15257 358 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 SF3A1Q15459 793 aaKnown RBP17.24■□□□□ 0.35
C9orf3-217ENST00000479161 KIZQ2M2Z5 673 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 ZNF579Q8NAF0 562 aaKnown RBP17.24■□□□□ 0.35
C9orf3-217ENST00000479161 MCPH1Q8NEM0 835 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 TMEM40Q8WWA1 233 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 RAD9AQ99638 391 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 MTRQ99707 1265 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 NT5C3AQ9H0P0 336 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 CDHR5Q9HBB8 845 aa17.24■□□□□ 0.35
C9orf3-217ENST00000479161 CD52P31358 61 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms